(38 nodes) Pole plasm network (Anopheles atroparvus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182IWV9	Rap-GAP domain-containing protein. (889 aa)
	A0A182JMB0	Uncharacterized protein. (464 aa)
	A0A182JMG7	RRM domain-containing protein. (485 aa)
	A0A182JN69	Uncharacterized protein. (704 aa)
	A0A240PP38	Armitage. (1194 aa)
	A0A182IQU7	Uncharacterized protein. (364 aa)
	A0A182IRN9	Small nuclear ribonucleoprotein G. (76 aa)
	A0A182ITU9	Uncharacterized protein; Belongs to the AAA ATPase family. (849 aa)
	A0A182IUD6	Uncharacterized protein. (725 aa)
	A0A182IV64	Uncharacterized protein. (823 aa)
	A0A182IVG0	Nudix hydrolase domain-containing protein. (514 aa)
	A0A182JJZ3	TUDOR-domain protein. (554 aa)
	A0A182IYX8	Ge1_WD40 domain-containing protein. (1695 aa)
	A0A182J0P5	Protein piwi; Belongs to the argonaute family. (892 aa)
	A0A182J0W1	Tudor domain-containing protein. (404 aa)
	A0A182J171	Uncharacterized protein. (427 aa)
	A0A182J1G5	Uncharacterized protein; Belongs to the DEAD box helicase family. (444 aa)
	A0A182J1T7	Small nuclear ribonucleoprotein Sm D3. (143 aa)
	A0A182J4G1	UBR-type domain-containing protein. (5584 aa)
	A0A182J534	Uncharacterized protein. (1134 aa)
	A0A182J725	Uncharacterized protein. (273 aa)
	A0A182J738	Uncharacterized protein. (149 aa)
	A0A182JA44	Protein oskar. (416 aa)
	A0A182JB91	Uncharacterized protein. (1185 aa)
	A0A182JDU8	Small nuclear ribonucleoprotein-associated protein. (204 aa)
	A0A182JH63	Uncharacterized protein; Belongs to the argonaute family. (916 aa)
	A0A182JH76	Uncharacterized protein. (616 aa)
	A0A182JHD9	WD_REPEATS_REGION domain-containing protein. (641 aa)
	A0A182JIM9	Uncharacterized protein. (1318 aa)
	A0A182IMZ5	Uncharacterized protein; Belongs to the DEAD box helicase family. (433 aa)
	A0A182IK09	Uncharacterized protein; Belongs to the DEAD box helicase family. (440 aa)
	A0A182IJU4	Uncharacterized protein. (1858 aa)
	A0A182INL0	Uncharacterized protein. (125 aa)
	A0A182IPL8	Importin N-terminal domain-containing protein. (925 aa)
	A0A182IPW2	Uncharacterized protein. (1200 aa)
	A0A182IQD7	Uncharacterized protein. (280 aa)
	A0A182IQN3	Uncharacterized protein. (2275 aa)
	A0A182JJB2	Uncharacterized protein. (545 aa)

Your Current Organism:

Anopheles atroparvus

NCBI taxonomy Id: 41427
Other names: A. atroparvus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182IJU4	A0A182IK09	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.646
A0A182IJU4	A0A182IMZ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.517
A0A182IJU4	A0A182IPW2	Uncharacterized protein.	Uncharacterized protein.	0.665
A0A182IJU4	A0A182J0P5	Uncharacterized protein.	Protein piwi; Belongs to the argonaute family.	0.979
A0A182IJU4	A0A182J1G5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.529
A0A182IJU4	A0A182JA44	Uncharacterized protein.	Protein oskar.	0.577
A0A182IJU4	A0A182JB91	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A182IJU4	A0A182JH63	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.922
A0A182IJU4	A0A182JH76	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A182IJU4	A0A182JJB2	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A182IJU4	A0A182JJZ3	Uncharacterized protein.	TUDOR-domain protein.	0.515
A0A182IJU4	A0A182JMB0	Uncharacterized protein.	Uncharacterized protein.	0.557
A0A182IJU4	A0A240PP38	Uncharacterized protein.	Armitage.	0.701
A0A182IK09	A0A182IJU4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.646
A0A182IK09	A0A182IMZ5	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.560
A0A182IK09	A0A182IPW2	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.765
A0A182IK09	A0A182IQD7	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.417
A0A182IK09	A0A182IQN3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.678
A0A182IK09	A0A182IRN9	Uncharacterized protein; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein G.	0.734
A0A182IK09	A0A182IUD6	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.996