5 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	arhgap35	Rho GTPase activating protein 35a. (1571 aa)
	arhgap5	Rho GTPase activating protein 5. (1548 aa)
	LOC111234595	Rho GTPase activating protein 35b. (1529 aa)
	LOC111222939	Ras homolog gene family, member Ab. (246 aa)
	LOC111230710	Uncharacterized protein. (193 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111222939	LOC111234595	ENSSDUP00000018265	ENSSDUP00000018179	Ras homolog gene family, member Ab.	Rho GTPase activating protein 35b.	0.963
LOC111222939	arhgap35	ENSSDUP00000018265	ENSSDUP00000007439	Ras homolog gene family, member Ab.	Rho GTPase activating protein 35a.	0.963
LOC111222939	arhgap5	ENSSDUP00000018265	ENSSDUP00000014423	Ras homolog gene family, member Ab.	Rho GTPase activating protein 5.	0.963
LOC111230710	LOC111234595	ENSSDUP00000022926	ENSSDUP00000018179	Uncharacterized protein.	Rho GTPase activating protein 35b.	0.963
LOC111230710	arhgap35	ENSSDUP00000022926	ENSSDUP00000007439	Uncharacterized protein.	Rho GTPase activating protein 35a.	0.963
LOC111230710	arhgap5	ENSSDUP00000022926	ENSSDUP00000014423	Uncharacterized protein.	Rho GTPase activating protein 5.	0.963
LOC111234595	LOC111222939	ENSSDUP00000018179	ENSSDUP00000018265	Rho GTPase activating protein 35b.	Ras homolog gene family, member Ab.	0.963
LOC111234595	LOC111230710	ENSSDUP00000018179	ENSSDUP00000022926	Rho GTPase activating protein 35b.	Uncharacterized protein.	0.963
LOC111234595	arhgap35	ENSSDUP00000018179	ENSSDUP00000007439	Rho GTPase activating protein 35b.	Rho GTPase activating protein 35a.	0.901
LOC111234595	arhgap5	ENSSDUP00000018179	ENSSDUP00000014423	Rho GTPase activating protein 35b.	Rho GTPase activating protein 5.	0.902
arhgap35	LOC111222939	ENSSDUP00000007439	ENSSDUP00000018265	Rho GTPase activating protein 35a.	Ras homolog gene family, member Ab.	0.963
arhgap35	LOC111230710	ENSSDUP00000007439	ENSSDUP00000022926	Rho GTPase activating protein 35a.	Uncharacterized protein.	0.963
arhgap35	LOC111234595	ENSSDUP00000007439	ENSSDUP00000018179	Rho GTPase activating protein 35a.	Rho GTPase activating protein 35b.	0.901
arhgap35	arhgap5	ENSSDUP00000007439	ENSSDUP00000014423	Rho GTPase activating protein 35a.	Rho GTPase activating protein 5.	0.901
arhgap5	LOC111222939	ENSSDUP00000014423	ENSSDUP00000018265	Rho GTPase activating protein 5.	Ras homolog gene family, member Ab.	0.963
arhgap5	LOC111230710	ENSSDUP00000014423	ENSSDUP00000022926	Rho GTPase activating protein 5.	Uncharacterized protein.	0.963
arhgap5	LOC111234595	ENSSDUP00000014423	ENSSDUP00000018179	Rho GTPase activating protein 5.	Rho GTPase activating protein 35b.	0.902
arhgap5	arhgap35	ENSSDUP00000014423	ENSSDUP00000007439	Rho GTPase activating protein 5.	Rho GTPase activating protein 35a.	0.901