39 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	raf1	Raf-1 proto-oncogene, serine/threonine kinase a. (635 aa)
	LOC111234902	Uncharacterized protein. (185 aa)
	LOC111216877	Non-specific serine/threonine protein kinase. (760 aa)
	mark3	Non-specific serine/threonine protein kinase. (752 aa)
	LOC111232170	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (423 aa)
	LOC111231556	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (244 aa)
	LOC111227828	A-Raf proto-oncogene, serine/threonine kinase. (609 aa)
	LOC111227664	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (247 aa)
	rala	V-ral simian leukemia viral oncogene homolog Aa (ras related). (198 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (387 aa)
	cby1	Chibby homolog 1 (Drosophila). (125 aa)
	LOC111231645	Uncharacterized protein. (546 aa)
	LOC111232296	3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2; Belongs to the 14-3-3 family. (247 aa)
	ENSSDUP00000015790	Si:ch211-26b3.4. (484 aa)
	ipcef1	PH domain-containing protein. (509 aa)
	cnksr3	Uncharacterized protein. (564 aa)
	LOC111234370	Connector enhancer of kinase suppressor of Ras 2b. (814 aa)
	cnksr2	Connector enhancer of kinase suppressor of Ras 2a. (1011 aa)
	ksr1	Kinase suppressor of ras 1a. (968 aa)
	YWHAB	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b; Belongs to the 14-3-3 family. (244 aa)
	rap1b	Uncharacterized protein. (184 aa)
	LOC111229041	Mitogen-activated protein kinase kinase 2b. (395 aa)
	samd10	Sterile alpha motif domain containing 10b. (167 aa)
	MARK3	Non-specific serine/threonine protein kinase. (742 aa)
	LOC111230214	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (392 aa)
	ksr2	Kinase suppressor of ras 2. (913 aa)
	LOC111222267	3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1; Belongs to the 14-3-3 family. (247 aa)
	LOC111232927	Non-specific serine/threonine protein kinase. (741 aa)
	ywhaq	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b; Belongs to the 14-3-3 family. (250 aa)
	braf	B-Raf proto-oncogene, serine/threonine kinase. (822 aa)
	LOC111234787	Kinase suppressor of ras 1b. (932 aa)
	LOC111224024	RAP1A, member of RAS oncogene family b. (185 aa)
	LOC111222210	Non-specific serine/threonine protein kinase. (761 aa)
	LOC111234286	Rap guanine nucleotide exchange factor (GEF) 6. (1692 aa)
	mlf1	Myeloid leukemia factor 1. (329 aa)
	mark2	Non-specific serine/threonine protein kinase. (764 aa)
	LOC111238733	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1536 aa)
	LOC111233083	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family. (255 aa)
	LOC111238212	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (255 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000015790	LOC111216877	ENSSDUP00000015790	ENSSDUP00000002945	Si:ch211-26b3.4.	Non-specific serine/threonine protein kinase.	0.444
ENSSDUP00000015790	LOC111222210	ENSSDUP00000015790	ENSSDUP00000028131	Si:ch211-26b3.4.	Non-specific serine/threonine protein kinase.	0.444
ENSSDUP00000015790	LOC111224024	ENSSDUP00000015790	ENSSDUP00000027325	Si:ch211-26b3.4.	RAP1A, member of RAS oncogene family b.	0.446
ENSSDUP00000015790	LOC111227828	ENSSDUP00000015790	ENSSDUP00000009047	Si:ch211-26b3.4.	A-Raf proto-oncogene, serine/threonine kinase.	0.542
ENSSDUP00000015790	LOC111229041	ENSSDUP00000015790	ENSSDUP00000021628	Si:ch211-26b3.4.	Mitogen-activated protein kinase kinase 2b.	0.426
ENSSDUP00000015790	LOC111231645	ENSSDUP00000015790	ENSSDUP00000011168	Si:ch211-26b3.4.	Uncharacterized protein.	0.889
ENSSDUP00000015790	LOC111232170	ENSSDUP00000015790	ENSSDUP00000007292	Si:ch211-26b3.4.	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	0.426
ENSSDUP00000015790	LOC111234787	ENSSDUP00000015790	ENSSDUP00000026943	Si:ch211-26b3.4.	Kinase suppressor of ras 1b.	0.545
ENSSDUP00000015790	LOC111234902	ENSSDUP00000015790	ENSSDUP00000001573	Si:ch211-26b3.4.	Uncharacterized protein.	0.446
ENSSDUP00000015790	braf	ENSSDUP00000015790	ENSSDUP00000025739	Si:ch211-26b3.4.	B-Raf proto-oncogene, serine/threonine kinase.	0.542
ENSSDUP00000015790	cnksr3	ENSSDUP00000015790	ENSSDUP00000016546	Si:ch211-26b3.4.	Uncharacterized protein.	0.899
ENSSDUP00000015790	ksr1	ENSSDUP00000015790	ENSSDUP00000020154	Si:ch211-26b3.4.	Kinase suppressor of ras 1a.	0.545
ENSSDUP00000015790	ksr2	ENSSDUP00000015790	ENSSDUP00000023691	Si:ch211-26b3.4.	Kinase suppressor of ras 2.	0.545
ENSSDUP00000015790	map2k1	ENSSDUP00000015790	ENSSDUP00000011099	Si:ch211-26b3.4.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.426
ENSSDUP00000015790	raf1	ENSSDUP00000015790	ENSSDUP00000000373	Si:ch211-26b3.4.	Raf-1 proto-oncogene, serine/threonine kinase a.	0.542
ENSSDUP00000015790	rala	ENSSDUP00000015790	ENSSDUP00000010316	Si:ch211-26b3.4.	V-ral simian leukemia viral oncogene homolog Aa (ras related).	0.457
ENSSDUP00000015790	rap1b	ENSSDUP00000015790	ENSSDUP00000020620	Si:ch211-26b3.4.	Uncharacterized protein.	0.446
LOC111216877	ENSSDUP00000015790	ENSSDUP00000002945	ENSSDUP00000015790	Non-specific serine/threonine protein kinase.	Si:ch211-26b3.4.	0.444
LOC111216877	LOC111222267	ENSSDUP00000002945	ENSSDUP00000024410	Non-specific serine/threonine protein kinase.	3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1; Belongs to the 14-3-3 family.	0.431
LOC111216877	LOC111227664	ENSSDUP00000002945	ENSSDUP00000009048	Non-specific serine/threonine protein kinase.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.446