(6 nodes) Rab11-family interacting protein class I, and Myosin V binding network (Seriola dumerili)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rab11a	RAB11a, member RAS oncogene family. (215 aa)
	LOC111225631	RAB11 family interacting protein 5a (class I). (1291 aa)
	LOC111222643	RAB11a, member RAS oncogene family, like. (216 aa)
	LOC111229181	Uncharacterized protein. (218 aa)
	rab11fip2	RAB11 family interacting protein 2 (class I). (467 aa)
	LOC111229642	Uncharacterized protein. (1240 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111222643	LOC111225631	ENSSDUP00000008559	ENSSDUP00000003994	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 5a (class I).	0.970
LOC111222643	LOC111229642	ENSSDUP00000008559	ENSSDUP00000028355	RAB11a, member RAS oncogene family, like.	Uncharacterized protein.	0.970
LOC111222643	rab11fip2	ENSSDUP00000008559	ENSSDUP00000026330	RAB11a, member RAS oncogene family, like.	RAB11 family interacting protein 2 (class I).	0.970
LOC111225631	LOC111222643	ENSSDUP00000003994	ENSSDUP00000008559	RAB11 family interacting protein 5a (class I).	RAB11a, member RAS oncogene family, like.	0.970
LOC111225631	LOC111229181	ENSSDUP00000003994	ENSSDUP00000018552	RAB11 family interacting protein 5a (class I).	Uncharacterized protein.	0.970
LOC111225631	LOC111229642	ENSSDUP00000003994	ENSSDUP00000028355	RAB11 family interacting protein 5a (class I).	Uncharacterized protein.	0.900
LOC111225631	rab11a	ENSSDUP00000003994	ENSSDUP00000003385	RAB11 family interacting protein 5a (class I).	RAB11a, member RAS oncogene family.	0.970
LOC111225631	rab11fip2	ENSSDUP00000003994	ENSSDUP00000026330	RAB11 family interacting protein 5a (class I).	RAB11 family interacting protein 2 (class I).	0.900
LOC111229181	LOC111225631	ENSSDUP00000018552	ENSSDUP00000003994	Uncharacterized protein.	RAB11 family interacting protein 5a (class I).	0.970
LOC111229181	LOC111229642	ENSSDUP00000018552	ENSSDUP00000028355	Uncharacterized protein.	Uncharacterized protein.	0.970
LOC111229181	rab11fip2	ENSSDUP00000018552	ENSSDUP00000026330	Uncharacterized protein.	RAB11 family interacting protein 2 (class I).	0.970
LOC111229642	LOC111222643	ENSSDUP00000028355	ENSSDUP00000008559	Uncharacterized protein.	RAB11a, member RAS oncogene family, like.	0.970
LOC111229642	LOC111225631	ENSSDUP00000028355	ENSSDUP00000003994	Uncharacterized protein.	RAB11 family interacting protein 5a (class I).	0.900
LOC111229642	LOC111229181	ENSSDUP00000028355	ENSSDUP00000018552	Uncharacterized protein.	Uncharacterized protein.	0.970
LOC111229642	rab11a	ENSSDUP00000028355	ENSSDUP00000003385	Uncharacterized protein.	RAB11a, member RAS oncogene family.	0.970
LOC111229642	rab11fip2	ENSSDUP00000028355	ENSSDUP00000026330	Uncharacterized protein.	RAB11 family interacting protein 2 (class I).	0.900
rab11a	LOC111225631	ENSSDUP00000003385	ENSSDUP00000003994	RAB11a, member RAS oncogene family.	RAB11 family interacting protein 5a (class I).	0.970
rab11a	LOC111229642	ENSSDUP00000003385	ENSSDUP00000028355	RAB11a, member RAS oncogene family.	Uncharacterized protein.	0.970
rab11a	rab11fip2	ENSSDUP00000003385	ENSSDUP00000026330	RAB11a, member RAS oncogene family.	RAB11 family interacting protein 2 (class I).	0.970
rab11fip2	LOC111222643	ENSSDUP00000026330	ENSSDUP00000008559	RAB11 family interacting protein 2 (class I).	RAB11a, member RAS oncogene family, like.	0.970