10 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111237172	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
	dstn	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (200 aa)
	limk2	LIM domain kinase 2. (665 aa)
	ssh2	Slingshot protein phosphatase 2a. (1336 aa)
	ssh1	Slingshot protein phosphatase 1a. (1066 aa)
	LOC111217068	Slingshot protein phosphatase 2b. (1241 aa)
	LOC111217057	LIM domain kinase 1b. (650 aa)
	cfl1	Cofilin 1; Belongs to the actin-binding proteins ADF family. (167 aa)
	LOC111234154	Slingshot protein phosphatase 1b. (684 aa)
	LOC111228045	LIM domain kinase 1a. (675 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111217057	LOC111217068	ENSSDUP00000024516	ENSSDUP00000022885	LIM domain kinase 1b.	Slingshot protein phosphatase 2b.	0.404
LOC111217057	LOC111234154	ENSSDUP00000024516	ENSSDUP00000025653	LIM domain kinase 1b.	Slingshot protein phosphatase 1b.	0.404
LOC111217057	LOC111237172	ENSSDUP00000024516	ENSSDUP00000000683	LIM domain kinase 1b.	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.	0.732
LOC111217057	cfl1	ENSSDUP00000024516	ENSSDUP00000024937	LIM domain kinase 1b.	Cofilin 1; Belongs to the actin-binding proteins ADF family.	0.732
LOC111217057	dstn	ENSSDUP00000024516	ENSSDUP00000002145	LIM domain kinase 1b.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.699
LOC111217057	ssh1	ENSSDUP00000024516	ENSSDUP00000016379	LIM domain kinase 1b.	Slingshot protein phosphatase 1a.	0.404
LOC111217057	ssh2	ENSSDUP00000024516	ENSSDUP00000016330	LIM domain kinase 1b.	Slingshot protein phosphatase 2a.	0.404
LOC111217068	LOC111217057	ENSSDUP00000022885	ENSSDUP00000024516	Slingshot protein phosphatase 2b.	LIM domain kinase 1b.	0.404
LOC111217068	LOC111228045	ENSSDUP00000022885	ENSSDUP00000028259	Slingshot protein phosphatase 2b.	LIM domain kinase 1a.	0.404
LOC111217068	LOC111237172	ENSSDUP00000022885	ENSSDUP00000000683	Slingshot protein phosphatase 2b.	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.	0.940
LOC111217068	cfl1	ENSSDUP00000022885	ENSSDUP00000024937	Slingshot protein phosphatase 2b.	Cofilin 1; Belongs to the actin-binding proteins ADF family.	0.940
LOC111217068	dstn	ENSSDUP00000022885	ENSSDUP00000002145	Slingshot protein phosphatase 2b.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.914
LOC111217068	limk2	ENSSDUP00000022885	ENSSDUP00000015871	Slingshot protein phosphatase 2b.	LIM domain kinase 2.	0.404
LOC111228045	LOC111217068	ENSSDUP00000028259	ENSSDUP00000022885	LIM domain kinase 1a.	Slingshot protein phosphatase 2b.	0.404
LOC111228045	LOC111234154	ENSSDUP00000028259	ENSSDUP00000025653	LIM domain kinase 1a.	Slingshot protein phosphatase 1b.	0.404
LOC111228045	LOC111237172	ENSSDUP00000028259	ENSSDUP00000000683	LIM domain kinase 1a.	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.	0.978
LOC111228045	cfl1	ENSSDUP00000028259	ENSSDUP00000024937	LIM domain kinase 1a.	Cofilin 1; Belongs to the actin-binding proteins ADF family.	0.978
LOC111228045	dstn	ENSSDUP00000028259	ENSSDUP00000002145	LIM domain kinase 1a.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.968
LOC111228045	limk2	ENSSDUP00000028259	ENSSDUP00000015871	LIM domain kinase 1a.	LIM domain kinase 2.	0.902
LOC111228045	ssh1	ENSSDUP00000028259	ENSSDUP00000016379	LIM domain kinase 1a.	Slingshot protein phosphatase 1a.	0.404