STRINGSTRING
LOC111237687 LOC111237687 atad5 atad5 rad17 rad17 pole4 pole4 LOC111228832 LOC111228832 pole pole rfc3 rfc3 pole2 pole2 pola2 pola2 rfc5 rfc5 fen1 fen1 pole3 pole3 lig1 lig1 rfc1 rfc1 prim1 prim1 rfc4 rfc4 rfc2 rfc2 prim2 prim2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111237687ATPase family AAA domain containing 5b. (887 aa)
atad5ATPase family AAA domain containing 5a. (1852 aa)
rad17RAD17 checkpoint clamp loader component. (635 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (129 aa)
LOC111228832Zgc:110269. (344 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2076 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (526 aa)
pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (146 aa)
lig1DNA ligase. (616 aa)
rfc1Replication factor C subunit 1. (1181 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (423 aa)
rfc4Replication factor C (activator 1) 4. (359 aa)
rfc2Replication factor C (activator 1) 2. (387 aa)
prim2DNA primase subunit 2. (592 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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