STRINGSTRING
RPL27A RPL27A rps21 rps21 LOC111238363 LOC111238363 rps26 rps26 rpl18 rpl18 RPL7A RPL7A rpl4 rpl4 rpl37 rpl37 dhx29 dhx29 rpl6 rpl6 RPL19 RPL19 RPL5-2 RPL5-2 LOC111219392 LOC111219392 LOC111217524 LOC111217524 LOC111219798 LOC111219798 rps23 rps23 LOC111230150 LOC111230150 eif2a eif2a rps2 rps2 RPL3L RPL3L LOC111224348 LOC111224348 mrps11 mrps11 rpl7l1 rpl7l1 rps9 rps9 zcchc17 zcchc17 rpsa rpsa ENSSDUP00000012814 ENSSDUP00000012814 ENSSDUP00000012997 ENSSDUP00000012997 fau fau Rps29 Rps29 LOC111226661 LOC111226661 uba52 uba52 LOC111240272 LOC111240272 ENSSDUP00000013916 ENSSDUP00000013916 LOC111240302 LOC111240302 rpl30 rpl30 RPL5 RPL5 LOC111231058 LOC111231058 rpl7 rpl7 rplp1 rplp1 rps28 rps28 LOC111228782 LOC111228782 rpl38 rpl38 rpl10 rpl10 rpl35 rpl35 eif2d eif2d rpl21 rpl21 rpl28 rpl28 rpl17 rpl17 rpl29 rpl29 ENSSDUP00000022981 ENSSDUP00000022981 ENSSDUP00000023177 ENSSDUP00000023177 LOC111223280 LOC111223280 mrpl1 mrpl1 rps5 rps5 rps3a rps3a rpl12 rpl12 ENSSDUP00000028342 ENSSDUP00000028342 rpl37a rpl37a rpl14 rpl14 rpl23a rpl23a rps6 rps6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
LOC111238363Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
rpl18Ribosomal protein L18. (156 aa)
RPL7ARibosomal protein L7a. (266 aa)
rpl4Ribosomal protein L4. (242 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (118 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1382 aa)
rpl6Ribosomal protein L6. (257 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (210 aa)
RPL5-2Ribosomal protein L5b. (371 aa)
LOC111219392Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
LOC111217524Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
LOC111219798Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
LOC11123015040S ribosomal protein S27. (89 aa)
eif2aEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (630 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (297 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (429 aa)
LOC111224348Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (183 aa)
mrps11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (191 aa)
rpl7l1Ribosomal protein L7-like 1. (247 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
zcchc17Zinc finger, CCHC domain containing 17. (251 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (301 aa)
ENSSDUP0000001281440S ribosomal protein S27. (89 aa)
ENSSDUP00000012997Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (102 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
Rps29Ribosomal protein S29. (89 aa)
LOC111226661Ribosomal protein L26. (178 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC111240272Ribos_L4_asso_C domain-containing protein. (234 aa)
ENSSDUP0000001391640S ribosomal protein S27. (91 aa)
LOC111240302Ribosomal_L16 domain-containing protein. (119 aa)
rpl30Ribosomal protein L30. (116 aa)
RPL5Ribosomal protein L5. (298 aa)
LOC111231058Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
rpl7Ribosomal protein L7. (260 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (129 aa)
rps28Ribosomal protein S28. (53 aa)
LOC111228782Ubiquitin A-52 residue ribosomal protein fusion product 1. (132 aa)
rpl38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (73 aa)
rpl10Ribosomal protein L10. (215 aa)
rpl35Ribosomal protein L35. (129 aa)
eif2dEukaryotic translation initiation factor 2D. (597 aa)
rpl21Ribosomal protein L21. (160 aa)
rpl28Ribosomal protein L28. (137 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
ENSSDUP00000022981Uncharacterized protein. (1351 aa)
ENSSDUP00000023177Uncharacterized protein. (121 aa)
LOC11122328040S ribosomal protein S27. (84 aa)
mrpl1Mitochondrial ribosomal protein L1. (321 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (259 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (167 aa)
ENSSDUP0000002834260S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (62 aa)
rpl37aRibosomal protein L37a. (91 aa)
rpl14Ribosomal protein L14. (136 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (170 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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