STRINGSTRING
LOC111238957 LOC111238957 edn1 edn1 ist1 ist1 LOC111227036 LOC111227036 derl2 derl2 CDKL5 CDKL5 LOC111238192 LOC111238192 slc44a4 slc44a4 dbnl dbnl LOC111229691 LOC111229691 LOC111218402 LOC111218402 extl3 extl3 srf srf mul1 mul1 ENSSDUP00000004798 ENSSDUP00000004798 ucn ucn disc1 disc1 zfyve27 zfyve27 LOC111236091 LOC111236091 f2 f2 LOC111231457 LOC111231457 spast spast LOC111224265 LOC111224265 mtor mtor LOC111222406 LOC111222406 LOC111219363 LOC111219363 LOC111224124 LOC111224124 rptor rptor exosc2 exosc2 tgfb2 tgfb2 LOC111219789 LOC111219789 n6amt1 n6amt1 anapc2 anapc2 ENSSDUP00000007945 ENSSDUP00000007945 golga4 golga4 nsmf nsmf parp2 parp2 rusc1 rusc1 bcl2 bcl2 bmpr2 bmpr2 LOC111228416 LOC111228416 sema7a sema7a ENSSDUP00000012202 ENSSDUP00000012202 ENSSDUP00000012310 ENSSDUP00000012310 fxn fxn rufy3 rufy3 ddx49 ddx49 ino80 ino80 LOC111235175 LOC111235175 LOC111236887 LOC111236887 LOC111223112 LOC111223112 ENSSDUP00000014569 ENSSDUP00000014569 LOC111220108 LOC111220108 psmd10 psmd10 LOC111218037 LOC111218037 hpn hpn LOC111218995 LOC111218995 ENSSDUP00000016538 ENSSDUP00000016538 prkn prkn LOC111226669 LOC111226669 rnf157 rnf157 LOC111238539 LOC111238539 LOC111218944 LOC111218944 LOC111237574 LOC111237574 fgfr1op fgfr1op ENSSDUP00000022613 ENSSDUP00000022613 LOC111232021 LOC111232021 nol12 nol12 map2k5 map2k5 wnt3a wnt3a cib1 cib1 LOC111232504 LOC111232504 sfrp2 sfrp2 syt1 syt1 adam10 adam10 adnp adnp LOC111225559 LOC111225559 exosc4 exosc4 LOC111223419 LOC111223419 shtn1 shtn1 LOC111219719 LOC111219719 dbn1 dbn1 LOC111217510 LOC111217510 klhl22 klhl22 LOC111237644 LOC111237644 usp47 usp47 LOC111219749 LOC111219749 plaa plaa LOC111219857 LOC111219857 supv3l1 supv3l1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111238957NMDA receptor synaptonuclear signaling and neuronal migration factor a. (575 aa)
edn1Endothelin 1. (187 aa)
ist1IST1 factor associated with ESCRT-III. (350 aa)
LOC111227036Parvalbumin 8; Belongs to the parvalbumin family. (109 aa)
derl2Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (239 aa)
CDKL5Cyclin dependent kinase like 5. (1074 aa)
LOC111238192Synaptotagmin IIa. (432 aa)
slc44a4Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family. (723 aa)
dbnlDrebrin-like b. (473 aa)
LOC111229691ADAM metallopeptidase domain 10b. (791 aa)
LOC111218402Uncharacterized protein; Belongs to the semaphorin family. (635 aa)
extl3Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family. (915 aa)
srfSerum response factor b. (639 aa)
mul1Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
ENSSDUP00000004798Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1173 aa)
ucnUrotensin 1. (147 aa)
disc1DISC1 scaffold protein. (855 aa)
zfyve27Zinc finger, FYVE domain containing 27. (490 aa)
LOC111236091ADAM metallopeptidase domain 17b. (853 aa)
f2Coagulation factor II (thrombin); Belongs to the peptidase S1 family. (504 aa)
LOC111231457Leucine-rich repeat LGI family, member 2b. (544 aa)
spastSpastin; Belongs to the AAA ATPase family. (464 aa)
LOC111224265Cyclin-dependent kinase-like 5. (1052 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2575 aa)
LOC111222406Si:ch211-113g11.6; Belongs to the semaphorin family. (622 aa)
LOC111219363Uncharacterized protein. (431 aa)
LOC111224124Uncharacterized protein. (340 aa)
rptorRegulatory associated protein of MTOR, complex 1. (1350 aa)
exosc2Exosome component 2. (294 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (421 aa)
LOC111219789Parvalbumin 9; Belongs to the parvalbumin family. (134 aa)
n6amt1N-6 adenine-specific DNA methyltransferase 1. (217 aa)
anapc2Anaphase promoting complex subunit 2; Belongs to the cullin family. (818 aa)
ENSSDUP00000007945ADF-H domain-containing protein. (141 aa)
golga4Golgin A4. (2110 aa)
nsmfNMDA receptor synaptonuclear signaling and neuronal migration factor b. (568 aa)
parp2Poly [ADP-ribose] polymerase. (659 aa)
rusc1RUN and SH3 domain containing 1. (518 aa)
bcl2BCL2 apoptosis regulator b. (228 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1017 aa)
LOC111228416Immunoglobulin superfamily containing leucine-rich repeat 2. (713 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (635 aa)
ENSSDUP00000012202Uncharacterized protein. (731 aa)
ENSSDUP00000012310Uncharacterized protein. (274 aa)
fxnFrataxin. (215 aa)
rufy3RUN and FYVE domain containing 3. (667 aa)
ddx49DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family. (490 aa)
ino80INO80 complex ATPase subunit. (1573 aa)
LOC111235175Leucine-rich, glioma inactivated 1a. (545 aa)
LOC111236887BH4_2 domain-containing protein. (225 aa)
LOC111223112ADNP homeobox 2b. (1015 aa)
ENSSDUP00000014569Uncharacterized protein. (1094 aa)
LOC111220108Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)
LOC111218037Fibronectin 1a. (2270 aa)
hpnHepsin; Belongs to the peptidase S1 family. (403 aa)
LOC111218995L1 cell adhesion molecule, paralog a. (1279 aa)
ENSSDUP00000016538Tripartite motif containing 32. (632 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (463 aa)
LOC111226669COMM domain containing 5. (211 aa)
rnf157Ring finger protein 157. (700 aa)
LOC111238539Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (230 aa)
LOC111218944Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (293 aa)
LOC111237574MADS-box domain-containing protein. (520 aa)
fgfr1opFGFR1 oncogene partner. (503 aa)
ENSSDUP00000022613Ig-like domain-containing protein. (261 aa)
LOC111232021Si:dkey-40c11.2. (701 aa)
nol12Nucleolar protein 12. (235 aa)
map2k5Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily. (449 aa)
wnt3aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (290 aa)
cib1Calcium and integrin binding 1 (calmyrin). (189 aa)
LOC111232504Transforming growth factor beta; Belongs to the TGF-beta family. (419 aa)
sfrp2Secreted frizzled-related protein 2. (295 aa)
syt1Synaptotagmin Ia. (422 aa)
adam10Uncharacterized protein. (755 aa)
adnpActivity-dependent neuroprotector homeobox b. (1070 aa)
LOC111225559ADAM metallopeptidase domain 17a. (871 aa)
exosc4Exosome component 4. (245 aa)
LOC111223419CDKN2A interacting protein. (320 aa)
shtn1Shootin 1. (421 aa)
LOC111219719Leucine-rich, glioma inactivated 1b. (550 aa)
dbn1Drebrin 1. (558 aa)
LOC111217510Rho family GTPase 2. (234 aa)
klhl22Kelch-like family member 22. (637 aa)
LOC111237644Uncharacterized protein. (1252 aa)
usp47Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1367 aa)
LOC111219749Synaptotagmin Vb. (408 aa)
plaaPhospholipase A2-activating protein. (776 aa)
LOC111219857Rho family GTPase 2. (230 aa)
supv3l1SUV3-like helicase. (781 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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