STRINGSTRING
ambra1 ambra1 LOC111216899 LOC111216899 lef1 lef1 LOC111237757 LOC111237757 hlx hlx dusp10 dusp10 ENSSDUP00000006496 ENSSDUP00000006496 sash3 sash3 LOC111232180 LOC111232180 LOC111225824 LOC111225824 ripk2 ripk2 LOC111221167 LOC111221167 LOC111228710 LOC111228710 LOC111225667 LOC111225667 ENSSDUP00000015191 ENSSDUP00000015191 myb myb ENSSDUP00000018714 ENSSDUP00000018714 cd83 cd83 Socs1 Socs1 gata3 gata3 zbtb1 zbtb1 ENSSDUP00000022124 ENSSDUP00000022124 ENSSDUP00000022394 ENSSDUP00000022394 xbp1 xbp1 syk syk LOC111223959 LOC111223959 SART1 SART1 TGFBR2 TGFBR2 il2rg il2rg bad bad il7r il7r cbfb cbfb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ambra1Autophagy/beclin-1 regulator 1b. (1380 aa)
LOC111216899Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
lef1Lymphoid enhancer-binding factor 1. (366 aa)
LOC111237757MALT paracaspase 1. (830 aa)
hlxH2.0-like homeo box 1 (Drosophila). (381 aa)
dusp10Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
ENSSDUP00000006496V-set immunoregulatory receptor. (259 aa)
sash3SAM and SH3 domain containing 3. (405 aa)
LOC111232180MALT paracaspase 2. (789 aa)
LOC111225824TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (592 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (600 aa)
LOC111221167Protein tyrosine phosphatase receptor type C. (1252 aa)
LOC111228710MALT paracaspase 3. (654 aa)
LOC111225667Tyrosine-protein kinase. (582 aa)
ENSSDUP00000015191Uncharacterized protein. (720 aa)
mybV-myb avian myeloblastosis viral oncogene homolog. (605 aa)
ENSSDUP00000018714ANK_REP_REGION domain-containing protein. (313 aa)
cd83Uncharacterized protein. (218 aa)
Socs1Uncharacterized protein. (407 aa)
gata3GATA binding protein 3. (443 aa)
zbtb1Zinc finger and BTB domain containing 1. (686 aa)
ENSSDUP00000022124Si:dkey-175m17.7. (886 aa)
ENSSDUP00000022394Si:dkey-28k24.2. (823 aa)
xbp1X-box binding protein 1. (264 aa)
sykTyrosine-protein kinase. (616 aa)
LOC111223959KRAP_IP3R_bind domain-containing protein. (676 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (738 aa)
TGFBR2TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (562 aa)
il2rgFibronectin type-III domain-containing protein. (341 aa)
badBCL2 associated agonist of cell death b. (167 aa)
il7rFibronectin type-III domain-containing protein. (359 aa)
cbfbCore-binding factor subunit beta. (188 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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