(58 nodes) Regulation of fat cell differentiation network (Seriola dumerili)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSDUP00000032581	CCDC144C domain-containing protein. (283 aa)
	asxl2	ASXL transcriptional regulator 2. (1204 aa)
	LOC111226181	Zinc finger protein 36, C3H type-like 1a. (372 aa)
	ENSSDUP00000013593	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (370 aa)
	LOC111235829	Zinc finger CCCH-type containing 12A. (625 aa)
	ENSSDUP00000013612	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (365 aa)
	LOC111234031	Formyl peptide receptor 1; Belongs to the G-protein coupled receptor 1 family. (377 aa)
	FFAR4	Free fatty acid receptor 4. (352 aa)
	LOC111220330	Synapse associated protein 1. (363 aa)
	tmem64	Transmembrane protein 64. (352 aa)
	ZADH2	Zinc binding alcohol dehydrogenase domain containing 2. (404 aa)
	cmklr1	Chemokine-like receptor 1; Belongs to the G-protein coupled receptor 1 family. (343 aa)
	ptgs2	Prostaglandin-endoperoxide synthase 2b. (667 aa)
	crebl2	cAMP responsive element binding protein-like 2. (121 aa)
	htr2a	5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a. (478 aa)
	ptprq	Protein tyrosine phosphatase receptor type Q. (2146 aa)
	LOC111238564	Matrix metallopeptidase 11a. (405 aa)
	metrnl	Meteorin like, glial cell differentiation regulator a. (286 aa)
	e2f1	E2F transcription factor 1. (445 aa)
	medag	Uncharacterized protein. (217 aa)
	sirt6	Sirtuin 6. (350 aa)
	LOC111224124	Uncharacterized protein. (340 aa)
	zfp36l2	Zinc finger protein 36, C3H type-like 2. (429 aa)
	noct	Nocturnin. (448 aa)
	LOC111216437	Zinc finger protein 36, C3H type-like 1b. (356 aa)
	LOC111216899	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	LOC111235085	CCAAT enhancer binding protein beta. (299 aa)
	LOC111221539	Sortilin. (841 aa)
	LOC111224108	Zgc:162730. (432 aa)
	VSTM2A	V-set and transmembrane domain containing 2A. (232 aa)
	dusp10	Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
	LOC111216969	Sb:cb81. (434 aa)
	ENSSDUP00000006065	Delta-like 2 homolog (Drosophila). (362 aa)
	LOC111225006	N-acyl phosphatidylethanolamine phospholipase D. (453 aa)
	sav1	Salvador family WW domain containing protein 1. (425 aa)
	LOC111230596	Si:dkey-206d17.12. (638 aa)
	GATA2	GATA binding protein 2. (459 aa)
	zfpm2	Zinc finger protein, FOG family member 2a. (1147 aa)
	LOC111217245	Kruppel-like factor 5 like. (436 aa)
	flcn	Folliculin. (559 aa)
	LOC111218842	Kruppel-like factor 5b. (211 aa)
	ENSSDUP00000022004	NR LBD domain-containing protein. (109 aa)
	ENSSDUP00000022124	Si:dkey-175m17.7. (886 aa)
	ENSSDUP00000022193	Ras responsive element binding protein 1a. (1540 aa)
	xbp1	X-box binding protein 1. (264 aa)
	LOC111232904	Formyl peptide receptor 1; Belongs to the G-protein coupled receptor 1 family. (360 aa)
	klf5	Progesterone immunomodulatory binding factor 1. (601 aa)
	sirt1	Deacetylase sirtuin-type domain-containing protein. (695 aa)
	sfrp2	Secreted frizzled-related protein 2. (295 aa)
	LOC111233348	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (441 aa)
	ddit3	DNA-damage-inducible transcript 3. (313 aa)
	LOC111229271	Nocturnin. (366 aa)
	SYAP1	Synapse associated protein 1. (336 aa)
	LOC111221230	ZnMc domain-containing protein. (485 aa)
	LOC111219382	Tribbles pseudokinase 3. (355 aa)
	LOC111221899	GATA binding protein 2a. (462 aa)
	carm1	Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (581 aa)
	LOC111226852	Nuclear receptor subfamily 1, group d, member 1. (448 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GATA2	LOC111233348	ENSSDUP00000010890	ENSSDUP00000025640	GATA binding protein 2.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.438
GATA2	carm1	ENSSDUP00000010890	ENSSDUP00000032509	GATA binding protein 2.	Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.438
GATA2	zfpm2	ENSSDUP00000010890	ENSSDUP00000011685	GATA binding protein 2.	Zinc finger protein, FOG family member 2a.	0.559
LOC111217245	LOC111235085	ENSSDUP00000012143	ENSSDUP00000002016	Kruppel-like factor 5 like.	CCAAT enhancer binding protein beta.	0.596
LOC111218842	LOC111235085	ENSSDUP00000012295	ENSSDUP00000002016	Kruppel-like factor 5b.	CCAAT enhancer binding protein beta.	0.596
LOC111219382	LOC111235085	ENSSDUP00000029688	ENSSDUP00000002016	Tribbles pseudokinase 3.	CCAAT enhancer binding protein beta.	0.564
LOC111219382	ddit3	ENSSDUP00000029688	ENSSDUP00000026375	Tribbles pseudokinase 3.	DNA-damage-inducible transcript 3.	0.604
LOC111219382	xbp1	ENSSDUP00000029688	ENSSDUP00000024540	Tribbles pseudokinase 3.	X-box binding protein 1.	0.426
LOC111221899	LOC111233348	ENSSDUP00000030069	ENSSDUP00000025640	GATA binding protein 2a.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.438
LOC111221899	carm1	ENSSDUP00000030069	ENSSDUP00000032509	GATA binding protein 2a.	Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.438
LOC111221899	zfpm2	ENSSDUP00000030069	ENSSDUP00000011685	GATA binding protein 2a.	Zinc finger protein, FOG family member 2a.	0.550
LOC111233348	GATA2	ENSSDUP00000025640	ENSSDUP00000010890	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	GATA binding protein 2.	0.438
LOC111233348	LOC111221899	ENSSDUP00000025640	ENSSDUP00000030069	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	GATA binding protein 2a.	0.438
LOC111235085	LOC111217245	ENSSDUP00000002016	ENSSDUP00000012143	CCAAT enhancer binding protein beta.	Kruppel-like factor 5 like.	0.596
LOC111235085	LOC111218842	ENSSDUP00000002016	ENSSDUP00000012295	CCAAT enhancer binding protein beta.	Kruppel-like factor 5b.	0.596
LOC111235085	LOC111219382	ENSSDUP00000002016	ENSSDUP00000029688	CCAAT enhancer binding protein beta.	Tribbles pseudokinase 3.	0.564
LOC111235085	ddit3	ENSSDUP00000002016	ENSSDUP00000026375	CCAAT enhancer binding protein beta.	DNA-damage-inducible transcript 3.	0.830
LOC111235085	e2f1	ENSSDUP00000002016	ENSSDUP00000020033	CCAAT enhancer binding protein beta.	E2F transcription factor 1.	0.421
LOC111235085	klf5	ENSSDUP00000002016	ENSSDUP00000024550	CCAAT enhancer binding protein beta.	Progesterone immunomodulatory binding factor 1.	0.596
carm1	GATA2	ENSSDUP00000032509	ENSSDUP00000010890	Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	GATA binding protein 2.	0.438