STRINGSTRING
dkk1 dkk1 gprc5b gprc5b irx3 irx3 LOC111236887 LOC111236887 LOC111224124 LOC111224124 gnl3 gnl3 LOC111227059 LOC111227059 TCF4 TCF4 LOC111218901 LOC111218901 ENSSDUP00000003934 ENSSDUP00000003934 LOC111220231 LOC111220231 lrrk2 lrrk2 LOC111229118 LOC111229118 glra3 glra3 LOC111232104 LOC111232104 LOC111239363 LOC111239363 LOC111222563 LOC111222563 foxg1 foxg1 zc4h2 zc4h2 SPAG9 SPAG9 LOC111226575 LOC111226575 nepro nepro LOC111229492 LOC111229492 ENSSDUP00000016538 ENSSDUP00000016538 brinp1 brinp1 fgf3 fgf3 LOC111223874 LOC111223874 ENSSDUP00000017445 ENSSDUP00000017445 MOSMO MOSMO LOC111234082 LOC111234082 vwc2l vwc2l LOC111218944 LOC111218944 LOC111220214 LOC111220214 ntf3 ntf3 LOC111228963 LOC111228963 rest rest LOC111216739 LOC111216739 mib1 mib1 lrrc45 lrrc45 ascl1 ascl1 mapk8ip3 mapk8ip3 EIF4ENIF1 EIF4ENIF1 ENSSDUP00000023402 ENSSDUP00000023402 sfrp2 sfrp2 id2 id2 lfng lfng LOC111227453 LOC111227453 ret ret LOC111231822 LOC111231822 LOC111230323 LOC111230323 tcf12 tcf12 ENSSDUP00000026038 ENSSDUP00000026038 vwc2 vwc2 six6 six6 disp3 disp3 CDH2 CDH2 dlx1 dlx1 dlx2 dlx2 fez1 fez1 LOC111229624 LOC111229624 LOC111220128 LOC111220128 med1 med1 LOC111227523 LOC111227523 LOC111227555 LOC111227555 ENSSDUP00000030194 ENSSDUP00000030194 lsm1 lsm1 ect2 ect2 impact impact NEUROD2 NEUROD2 mmd mmd ENSSDUP00000032220 ENSSDUP00000032220 ENSSDUP00000008936 ENSSDUP00000008936 casz1 casz1 Ferd3l Ferd3l cntn2 cntn2 LOC111235645 LOC111235645 bcl2 bcl2 phox2b phox2b LOC111232632 LOC111232632 LOC111229088 LOC111229088 LOC111230181 LOC111230181 LOC111230579 LOC111230579 EIF2AK4 EIF2AK4 LOC111226631 LOC111226631
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dkk1Dickkopf WNT signaling pathway inhibitor 1a. (297 aa)
gprc5bG protein-coupled receptor, class C, group 5, member Ba. (398 aa)
irx3Iroquois homeobox 3a. (426 aa)
LOC111236887BH4_2 domain-containing protein. (225 aa)
LOC111224124Uncharacterized protein. (340 aa)
gnl3Guanine nucleotide binding protein-like 3 (nucleolar). (553 aa)
LOC111227059Sperm associated antigen 9a. (1239 aa)
TCF4Transcription factor 4. (628 aa)
LOC111218901Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (423 aa)
ENSSDUP00000003934G protein-coupled receptor, class C, group 5, member Bb. (425 aa)
LOC111220231Uncharacterized protein. (167 aa)
lrrk2Leucine-rich repeat kinase 2. (2405 aa)
LOC111229118Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (420 aa)
glra3Glycine receptor, alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (469 aa)
LOC111232104Transcription factor 3b. (631 aa)
LOC111239363Neurogenin 1. (199 aa)
LOC111222563Fork-head domain-containing protein. (406 aa)
foxg1Forkhead box G1a. (329 aa)
zc4h2Zinc finger, C4H2 domain containing. (224 aa)
SPAG9Sperm associated antigen 9. (1351 aa)
LOC111226575G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (412 aa)
neproNucleolus and neural progenitor protein. (484 aa)
LOC111229492Suppressor of cytokine signaling 2. (200 aa)
ENSSDUP00000016538Tripartite motif containing 32. (632 aa)
brinp1Bone morphogenetic protein/retinoic acid inducible neural-specific 1. (761 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (244 aa)
LOC111223874Forkhead box G1d. (362 aa)
ENSSDUP00000017445Fork-head domain-containing protein. (306 aa)
MOSMOModulator of smoothened. (167 aa)
LOC111234082Uncharacterized protein. (922 aa)
vwc2lVon Willebrand factor C domain containing 2 like. (222 aa)
LOC111218944Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (293 aa)
LOC111220214SIX homeobox 3b. (277 aa)
ntf3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (297 aa)
LOC111228963Transcription factor 3a. (660 aa)
restRE1-silencing transcription factor. (984 aa)
LOC111216739Monocyte to macrophage differentiation associated 2. (241 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1045 aa)
lrrc45Leucine rich repeat containing 45. (674 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (201 aa)
mapk8ip3Mitogen-activated protein kinase 8 interacting protein 3. (1307 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E nuclear import factor 1. (859 aa)
ENSSDUP00000023402Achaete-scute family bHLH transcription factor 1b. (184 aa)
sfrp2Secreted frizzled-related protein 2. (295 aa)
id2Inhibitor of DNA binding 2a. (136 aa)
lfngBeta-1,3-N-acetylglucosaminyltransferase. (369 aa)
LOC111227453SIX homeobox 3a. (294 aa)
retProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1111 aa)
LOC111231822Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (917 aa)
LOC111230323Monocyte to macrophage differentiation associated 2. (239 aa)
tcf12Transcription factor 12. (696 aa)
ENSSDUP00000026038Neurogenin 3. (201 aa)
vwc2Von Willebrand factor C domain containing 2. (310 aa)
six6SIX homeobox 6a. (245 aa)
disp3Dispatched RND transporter family member 3. (1326 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (910 aa)
dlx1Distal-less homeobox 1a. (253 aa)
dlx2Distal-less homeobox 2b. (276 aa)
fez1Fasciculation and elongation protein zeta 1 (zygin I). (409 aa)
LOC111229624BHLH domain-containing protein. (503 aa)
LOC111220128Neuronal differentiation 2. (359 aa)
med1Mediator complex subunit 1. (1876 aa)
LOC111227523Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 2. (763 aa)
LOC111227555Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1. (761 aa)
ENSSDUP00000030194NGF domain-containing protein; Belongs to the NGF-beta family. (480 aa)
lsm1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa)
ect2Epithelial cell transforming 2. (1129 aa)
impactImpact RWD domain protein. (323 aa)
NEUROD2Neurogenic differentiation factor. (356 aa)
mmdMonocyte to macrophage differentiation-associated. (239 aa)
ENSSDUP00000032220Fork-head domain-containing protein. (234 aa)
ENSSDUP00000008936Inhibitor of DNA binding 4. (173 aa)
casz1Castor zinc finger 1. (1611 aa)
Ferd3lFer3-like bHLH transcription factor. (73 aa)
cntn2Contactin 2. (1039 aa)
LOC111235645SIX homeobox 7. (260 aa)
bcl2BCL2 apoptosis regulator b. (228 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
LOC111232632Glycine receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (431 aa)
LOC111229088Bone morphogenetic protein/retinoic acid inducible neural-specific 3b. (792 aa)
LOC111230181Si:dkey-17m8.1. (755 aa)
LOC111230579Rho guanine nucleotide exchange factor (GEF) 1a. (935 aa)
EIF2AK4Eukaryotic translation initiation factor 2 alpha kinase 4. (1660 aa)
LOC111226631NK2 homeobox 5. (329 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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