(11 nodes) Histone H3-K9 methylation network (Seriola dumerili)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	setdb1	SET domain bifurcated histone lysine methyltransferase 1b. (1246 aa)
	ENSSDUP00000013924	ANK_REP_REGION domain-containing protein. (118 aa)
	LOC111219884	Uncharacterized protein. (710 aa)
	prdm5	Zinc finger protein. (590 aa)
	bend3	BEN domain containing 3. (818 aa)
	ehmt2	Euchromatic histone-lysine N-methyltransferase 2. (1205 aa)
	LOC111221113	Euchromatic histone-lysine N-methyltransferase 1b. (1309 aa)
	arid4b	Translocase of outer mitochondrial membrane 20. (1302 aa)
	suv39h1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (414 aa)
	LOC111235520	Uncharacterized protein. (667 aa)
	ENSSDUP00000000441	AT rich interactive domain 4A (RBP1-like). (1196 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000000441	arid4b	ENSSDUP00000000441	ENSSDUP00000004020	AT rich interactive domain 4A (RBP1-like).	Translocase of outer mitochondrial membrane 20.	0.643
ENSSDUP00000013924	suv39h1	ENSSDUP00000013924	ENSSDUP00000000827	ANK_REP_REGION domain-containing protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.419
LOC111221113	suv39h1	ENSSDUP00000004614	ENSSDUP00000000827	Euchromatic histone-lysine N-methyltransferase 1b.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.419
LOC111235520	suv39h1	ENSSDUP00000003977	ENSSDUP00000000827	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.484
arid4b	ENSSDUP00000000441	ENSSDUP00000004020	ENSSDUP00000000441	Translocase of outer mitochondrial membrane 20.	AT rich interactive domain 4A (RBP1-like).	0.643
ehmt2	suv39h1	ENSSDUP00000027813	ENSSDUP00000000827	Euchromatic histone-lysine N-methyltransferase 2.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.419
setdb1	suv39h1	ENSSDUP00000010261	ENSSDUP00000000827	SET domain bifurcated histone lysine methyltransferase 1b.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.484
suv39h1	ENSSDUP00000013924	ENSSDUP00000000827	ENSSDUP00000013924	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	ANK_REP_REGION domain-containing protein.	0.419
suv39h1	LOC111221113	ENSSDUP00000000827	ENSSDUP00000004614	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Euchromatic histone-lysine N-methyltransferase 1b.	0.419
suv39h1	LOC111235520	ENSSDUP00000000827	ENSSDUP00000003977	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Uncharacterized protein.	0.484
suv39h1	ehmt2	ENSSDUP00000000827	ENSSDUP00000027813	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Euchromatic histone-lysine N-methyltransferase 2.	0.419
suv39h1	setdb1	ENSSDUP00000000827	ENSSDUP00000010261	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	SET domain bifurcated histone lysine methyltransferase 1b.	0.484