32 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gmfb	Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily. (142 aa)
	LOC111232666	SEC24 homolog B, COPII coat complex component. (1212 aa)
	sec24d	SEC24 homolog D, COPII coat complex component. (1078 aa)
	LOC111238489	Gelsolin a. (730 aa)
	LOC111228815	Scinderin like b. (720 aa)
	LOC111232306	Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily. (142 aa)
	LOC111222861	Twinfilin actin-binding protein 2b. (347 aa)
	sec24c	SEC24 homolog C, COPII coat complex component. (1233 aa)
	LOC111232021	Si:dkey-40c11.2. (701 aa)
	LOC111220921	Villin-like. (896 aa)
	LOC111220249	Supervillin d. (1497 aa)
	LOC111232033	Scinderin like a. (765 aa)
	LOC111217726	Supervillin c. (1590 aa)
	dbn1	Drebrin 1. (558 aa)
	SVIL	Supervillin. (1643 aa)
	LOC111229204	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (766 aa)
	sec24a	SEC24 homolog A, COPII coat complex component. (1156 aa)
	dbnl	Drebrin-like b. (473 aa)
	LOC111237448	Uncharacterized protein. (769 aa)
	capg	Capping protein (actin filament), gelsolin-like b. (344 aa)
	LOC111237157	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (764 aa)
	cfl1	Cofilin 1; Belongs to the actin-binding proteins ADF family. (167 aa)
	LOC111227353	Uncharacterized protein. (1026 aa)
	twf1	Twinfilin actin-binding protein 1a. (350 aa)
	LOC111237172	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
	LOC111222846	WD repeat domain 82. (595 aa)
	dstn	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (200 aa)
	flii	FLII actin remodeling protein. (1276 aa)
	LOC111228221	Supervillin a. (1821 aa)
	LOC111221521	Advillin. (767 aa)
	cotl1	Coactosin-like F-actin binding protein 1. (142 aa)
	ENSSDUP00000007945	ADF-H domain-containing protein. (141 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111220921	LOC111222861	ENSSDUP00000023242	ENSSDUP00000018315	Villin-like.	Twinfilin actin-binding protein 2b.	0.433
LOC111220921	twf1	ENSSDUP00000023242	ENSSDUP00000032087	Villin-like.	Twinfilin actin-binding protein 1a.	0.433
LOC111221521	LOC111222861	ENSSDUP00000005564	ENSSDUP00000018315	Advillin.	Twinfilin actin-binding protein 2b.	0.433
LOC111221521	twf1	ENSSDUP00000005564	ENSSDUP00000032087	Advillin.	Twinfilin actin-binding protein 1a.	0.433
LOC111222861	LOC111220921	ENSSDUP00000018315	ENSSDUP00000023242	Twinfilin actin-binding protein 2b.	Villin-like.	0.433
LOC111222861	LOC111221521	ENSSDUP00000018315	ENSSDUP00000005564	Twinfilin actin-binding protein 2b.	Advillin.	0.433
LOC111222861	LOC111228815	ENSSDUP00000018315	ENSSDUP00000016238	Twinfilin actin-binding protein 2b.	Scinderin like b.	0.452
LOC111222861	LOC111232033	ENSSDUP00000018315	ENSSDUP00000031235	Twinfilin actin-binding protein 2b.	Scinderin like a.	0.452
LOC111222861	LOC111232306	ENSSDUP00000018315	ENSSDUP00000016787	Twinfilin actin-binding protein 2b.	Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.	0.438
LOC111222861	LOC111237172	ENSSDUP00000018315	ENSSDUP00000000683	Twinfilin actin-binding protein 2b.	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.	0.517
LOC111222861	LOC111237448	ENSSDUP00000018315	ENSSDUP00000025733	Twinfilin actin-binding protein 2b.	Uncharacterized protein.	0.507
LOC111222861	LOC111238489	ENSSDUP00000018315	ENSSDUP00000016081	Twinfilin actin-binding protein 2b.	Gelsolin a.	0.507
LOC111222861	capg	ENSSDUP00000018315	ENSSDUP00000028298	Twinfilin actin-binding protein 2b.	Capping protein (actin filament), gelsolin-like b.	0.507
LOC111222861	cfl1	ENSSDUP00000018315	ENSSDUP00000024937	Twinfilin actin-binding protein 2b.	Cofilin 1; Belongs to the actin-binding proteins ADF family.	0.517
LOC111222861	dstn	ENSSDUP00000018315	ENSSDUP00000002145	Twinfilin actin-binding protein 2b.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.509
LOC111222861	gmfb	ENSSDUP00000018315	ENSSDUP00000008405	Twinfilin actin-binding protein 2b.	Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.	0.438
LOC111227353	LOC111229204	ENSSDUP00000024764	ENSSDUP00000029210	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.899
LOC111227353	LOC111232666	ENSSDUP00000024764	ENSSDUP00000009859	Uncharacterized protein.	SEC24 homolog B, COPII coat complex component.	0.895
LOC111227353	LOC111237157	ENSSDUP00000024764	ENSSDUP00000025544	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.899
LOC111227353	sec24a	ENSSDUP00000024764	ENSSDUP00000029051	Uncharacterized protein.	SEC24 homolog A, COPII coat complex component.	0.895