STRINGSTRING
ENSSDUP00000028342 ENSSDUP00000028342 rpl12 rpl12 rps3a rps3a rps5 rps5 eif3a eif3a rps10 rps10 LOC111223280 LOC111223280 rps16 rps16 rps11 rps11 LOC111233624 LOC111233624 rpl13a rpl13a ENSSDUP00000023177 ENSSDUP00000023177 eif3b eif3b ENSSDUP00000022981 ENSSDUP00000022981 mrnip mrnip eif2s2 eif2s2 kxd1 kxd1 rpl29 rpl29 rpl17 rpl17 rpl32 rpl32 rpl28 rpl28 rps4x rps4x rpl21 rpl21 RPS19 RPS19 LOC111217376 LOC111217376 arl6ip1 arl6ip1 rsad1 rsad1 rpl35 rpl35 LOC111225892 LOC111225892 rpl10 rpl10 rpl38 rpl38 rps12 rps12 eif3h eif3h rps15 rps15 rps28 rps28 pabpc4 pabpc4 rplp1 rplp1 rpl7 rpl7 rpl18a rpl18a rps18 rps18 LOC111223194 LOC111223194 RPL5 RPL5 rpl30 rpl30 rpl15 rpl15 rps24 rps24 rpl8 rpl8 LOC111240302 LOC111240302 ENSSDUP00000013916 ENSSDUP00000013916 rpl39 rpl39 rnpepl1 rnpepl1 RPL36A RPL36A LOC111223568 LOC111223568 eif3l eif3l LOC111238303 LOC111238303 rps3 rps3 rpl23a rpl23a eif2s3 eif2s3 eif2s1 eif2s1 rpl22l1 rpl22l1 rps27a rps27a eif3k eif3k LOC111232430 LOC111232430 LOC111233766 LOC111233766 rps6 rps6 rpl37a rpl37a eif3i eif3i RPL27A RPL27A rpl14 rpl14 rpl13 rpl13 rps13 rps13 LOC111224111 LOC111224111 eif3m eif3m eif4a2 eif4a2 LOC111240272 LOC111240272 ENSSDUP00000013579 ENSSDUP00000013579 LOC111226661 LOC111226661 LOC111227790 LOC111227790 rpl36 rpl36 Rps29 Rps29 ENSSDUP00000012997 ENSSDUP00000012997 ENSSDUP00000012814 ENSSDUP00000012814 rpsa rpsa LOC111235809 LOC111235809 LOC111235257 LOC111235257 rps9 rps9 rpl7l1 rpl7l1 LOC111230540 LOC111230540 rpl11 rpl11 RPL3L RPL3L rps2 rps2 rps7 rps7 eif3j eif3j rpl4 rpl4 RPL7A RPL7A rpl18 rpl18 rps26 rps26 LOC111238363 LOC111238363 rpl34 rpl34 rps8 rps8 rpl23 rpl23 pabpc1 pabpc1 rps21 rps21 eif4h eif4h LOC111230150 LOC111230150 rpl24 rpl24 ENSSDUP00000007813 ENSSDUP00000007813 rpl35a rpl35a RPS20 RPS20 LOC111217171 LOC111217171 rps15a rps15a eif3f eif3f LOC111219798 LOC111219798 eif3g eif3g rsrc1 rsrc1 RPS17 RPS17 LOC111217524 LOC111217524 rpl27 rpl27 LOC111219392 LOC111219392 rpl31 rpl31 LOC111236507 LOC111236507 RPL5-2 RPL5-2 rpl9 rpl9 RPL19 RPL19 rplp0 rplp0 rpl6 rpl6 eif4b eif4b LOC111219982 LOC111219982 eif3d eif3d rps14 rps14 rpl37 rpl37 rps23 rps23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSDUP0000002834260S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (62 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (167 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (259 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
eif3aEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1234 aa)
rps10Ribosomal protein S10. (178 aa)
LOC11122328040S ribosomal protein S27. (84 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
rps11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (210 aa)
LOC111233624Ribosomal protein L22. (129 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
ENSSDUP00000023177Uncharacterized protein. (121 aa)
eif3bEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (680 aa)
ENSSDUP00000022981Uncharacterized protein. (1351 aa)
mrnipUncharacterized protein. (321 aa)
eif2s2Eukaryotic translation initiation factor 2, subunit 2 beta. (322 aa)
kxd1KxDL motif containing 1. (184 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
rpl32Ribosomal protein L32. (135 aa)
rpl28Ribosomal protein L28. (137 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
rpl21Ribosomal protein L21. (160 aa)
RPS19Ribosomal protein S19. (152 aa)
LOC111217376Poly(A) binding protein, cytoplasmic 1-like. (656 aa)
arl6ip1ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (453 aa)
rpl35Ribosomal protein L35. (129 aa)
LOC111225892Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family. (263 aa)
rpl10Ribosomal protein L10. (215 aa)
rpl38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (73 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (193 aa)
eif3hEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (341 aa)
rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (201 aa)
rps28Ribosomal protein S28. (53 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (627 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (129 aa)
rpl7Ribosomal protein L7. (260 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
LOC111223194Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (631 aa)
RPL5Ribosomal protein L5. (298 aa)
rpl30Ribosomal protein L30. (116 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
rpl8Ribosomal protein L8. (257 aa)
LOC111240302Ribosomal_L16 domain-containing protein. (119 aa)
ENSSDUP0000001391640S ribosomal protein S27. (91 aa)
rpl39Ribosomal protein L39. (76 aa)
rnpepl1Arginyl aminopeptidase like 1. (717 aa)
RPL36ARibosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (146 aa)
LOC111223568Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family. (404 aa)
eif3lEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (576 aa)
LOC111238303Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (144 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (170 aa)
eif2s3Eukaryotic translation initiation factor 2, subunit 3 gamma. (472 aa)
eif2s1Eukaryotic translation initiation factor 2, subunit 1 alpha b. (330 aa)
rpl22l1Ribosomal protein L22-like 1. (129 aa)
rps27aRibosomal protein S27a. (156 aa)
eif3kEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (344 aa)
LOC111232430Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family. (216 aa)
LOC111233766Uncharacterized protein. (130 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
rpl37aRibosomal protein L37a. (91 aa)
eif3iEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (325 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
rpl14Ribosomal protein L14. (136 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (201 aa)
LOC111224111Uncharacterized protein. (154 aa)
eif3mEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (375 aa)
eif4a2Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family. (411 aa)
LOC111240272Ribos_L4_asso_C domain-containing protein. (234 aa)
ENSSDUP00000013579Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (114 aa)
LOC111226661Ribosomal protein L26. (178 aa)
LOC111227790Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
Rps29Ribosomal protein S29. (89 aa)
ENSSDUP00000012997Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (102 aa)
ENSSDUP0000001281440S ribosomal protein S27. (89 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (301 aa)
LOC111235809Ribosomal protein S19. (187 aa)
LOC111235257Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family. (210 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
rpl7l1Ribosomal protein L7-like 1. (247 aa)
LOC111230540Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (446 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (200 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (429 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (297 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (205 aa)
eif3jEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (245 aa)
rpl4Ribosomal protein L4. (242 aa)
RPL7ARibosomal protein L7a. (266 aa)
rpl18Ribosomal protein L18. (156 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
LOC111238363Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl34Ribosomal protein L34. (123 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (213 aa)
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
eif4hEukaryotic translation initiation factor 4h. (265 aa)
LOC11123015040S ribosomal protein S27. (89 aa)
rpl24Ribosomal protein L24. (157 aa)
ENSSDUP0000000781340S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (92 aa)
rpl35aRibosomal protein L35a. (110 aa)
RPS20Ribosomal protein S20. (119 aa)
LOC111217171RNA binding motif protein 14a. (548 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (164 aa)
eif3fEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (286 aa)
LOC111219798Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
eif3gEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (307 aa)
rsrc1Arginine/serine-rich coiled-coil 1. (228 aa)
RPS17Ribosomal protein S17. (134 aa)
LOC111217524Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
LOC111219392Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl31Ribosomal protein L31. (124 aa)
LOC111236507NAD(P)-bd_dom domain-containing protein. (219 aa)
RPL5-2Ribosomal protein L5b. (371 aa)
rpl9Ribosomal protein L9. (241 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (210 aa)
rplp0Ribosomal protein, large, P0. (253 aa)
rpl6Ribosomal protein L6. (257 aa)
eif4bEukaryotic translation initiation factor 4Bb. (655 aa)
LOC111219982Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (928 aa)
eif3dEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (552 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (118 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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