82 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psma5	Proteasome subunit alpha type. (241 aa)
	psma1	Proteasome subunit alpha type. (266 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psmb3	Proteasome subunit beta. (205 aa)
	LOC111236888	Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
	anapc10	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (206 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	psme3	Proteasome activator subunit 3. (256 aa)
	psme2	Proteasome activator subunit 2. (255 aa)
	LOC111232798	Proteasome subunit alpha type. (246 aa)
	LOC111236900	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
	LOC111230559	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (206 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (441 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	LOC111223824	Proteasome subunit beta. (317 aa)
	ENSSDUP00000016099	Proteasome subunit beta. (303 aa)
	LOC111228782	Ubiquitin A-52 residue ribosomal protein fusion product 1. (132 aa)
	LOC111219593	BRD4 interacting chromatin remodeling complex associated protein like. (823 aa)
	LOC111219851	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	LOC111239148	Proteasome subunit beta. (233 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (330 aa)
	psmd3	Proteasome 26S subunit, non-ATPase 3. (519 aa)
	tm7sf3	Transmembrane 7 superfamily member 3. (553 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	LOC111220098	Proteasome activator subunit 4b. (1764 aa)
	ubc	Uncharacterized protein. (748 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	LOC111223275	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	ube2c	Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)
	anapc16	Anaphase promoting complex subunit 16. (108 aa)
	anapc1	Anaphase promoting complex subunit 1. (1978 aa)
	psmb7	Proteasome subunit beta. (277 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (392 aa)
	ENSSDUP00000028071	Proteasome subunit beta. (274 aa)
	psme1	Proteasome activator subunit 1. (255 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	LOC111217160	Family with sequence similarity 89 member B. (170 aa)
	psma8	Proteasome subunit alpha type. (296 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (290 aa)
	LOC111221130	Proteasome subunit beta. (278 aa)
	cdc26	Cell division cycle 26 homolog. (97 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	LOC111239430	Proteasome subunit beta. (216 aa)
	LOC111239429	Proteasome subunit beta 12. (217 aa)
	LOC111239428	Proteasome subunit beta. (275 aa)
	psmb8	Proteasome subunit beta. (276 aa)
	LOC111229617	Proteasome subunit alpha type. (261 aa)
	cdc27	Cell division cycle 27. (803 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	anapc11	APC11 anaphase promoting complex subunit 11 homolog (yeast). (84 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC111237191	Proteasome 26S subunit, non-ATPase 4b. (375 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
	PSMA4	Proteasome subunit alpha type. (261 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	anapc15	Anaphase promoting complex subunit 15. (122 aa)
	anapc4	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family. (780 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	bicra	BRD4 interacting chromatin remodeling complex associated protein. (1788 aa)
	anapc5	Anaphase promoting complex subunit 5. (773 aa)
	cdc16	Cell division cycle 16 homolog (S. cerevisiae). (619 aa)
	psmf1	Proteasome inhibitor subunit 1. (277 aa)
	cdc20	Cell division cycle 20 homolog. (502 aa)
	ube2s	Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family. (237 aa)
	ubb	Uncharacterized protein. (153 aa)
	cdc23	CDC23 (cell division cycle 23, yeast, homolog). (575 aa)
	psme4	Proteasome activator subunit 4a. (1762 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (455 aa)
	LOC111237983	Proteasome subunit alpha type. (246 aa)
	PSMD11	PCI domain-containing protein. (422 aa)
	anapc2	Anaphase promoting complex subunit 2; Belongs to the cullin family. (818 aa)
	LOC111232731	Uncharacterized protein. (184 aa)
	fam89a	Family with sequence similarity 89 member A. (180 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (963 aa)
	ENSSDUP00000006945	Uncharacterized protein. (267 aa)
	anapc7	Anaphase promoting complex subunit 7. (565 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000006945	ENSSDUP00000016099	ENSSDUP00000006945	ENSSDUP00000016099	Uncharacterized protein.	Proteasome subunit beta.	0.804
ENSSDUP00000006945	ENSSDUP00000028071	ENSSDUP00000006945	ENSSDUP00000028071	Uncharacterized protein.	Proteasome subunit beta.	0.804
ENSSDUP00000006945	LOC111219593	ENSSDUP00000006945	ENSSDUP00000018708	Uncharacterized protein.	BRD4 interacting chromatin remodeling complex associated protein like.	0.499
ENSSDUP00000006945	LOC111219851	ENSSDUP00000006945	ENSSDUP00000014481	Uncharacterized protein.	Proteasome 26S subunit, non-ATPase 11b.	0.970
ENSSDUP00000006945	LOC111220098	ENSSDUP00000006945	ENSSDUP00000023077	Uncharacterized protein.	Proteasome activator subunit 4b.	0.659
ENSSDUP00000006945	LOC111221130	ENSSDUP00000006945	ENSSDUP00000029852	Uncharacterized protein.	Proteasome subunit beta.	0.915
ENSSDUP00000006945	LOC111223275	ENSSDUP00000006945	ENSSDUP00000024228	Uncharacterized protein.	Proteasome 26S subunit, non-ATPase 4a.	0.950
ENSSDUP00000006945	LOC111223824	ENSSDUP00000006945	ENSSDUP00000016021	Uncharacterized protein.	Proteasome subunit beta.	0.909
ENSSDUP00000006945	LOC111228782	ENSSDUP00000006945	ENSSDUP00000018383	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.828
ENSSDUP00000006945	LOC111229617	ENSSDUP00000006945	ENSSDUP00000032726	Uncharacterized protein.	Proteasome subunit alpha type.	0.942
ENSSDUP00000006945	LOC111230559	ENSSDUP00000006945	ENSSDUP00000015860	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.410
ENSSDUP00000006945	LOC111232798	ENSSDUP00000006945	ENSSDUP00000014549	Uncharacterized protein.	Proteasome subunit alpha type.	0.938
ENSSDUP00000006945	LOC111236888	ENSSDUP00000006945	ENSSDUP00000015819	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family.	0.410
ENSSDUP00000006945	LOC111236900	ENSSDUP00000006945	ENSSDUP00000015837	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.410
ENSSDUP00000006945	LOC111237191	ENSSDUP00000006945	ENSSDUP00000002962	Uncharacterized protein.	Proteasome 26S subunit, non-ATPase 4b.	0.950
ENSSDUP00000006945	LOC111237983	ENSSDUP00000006945	ENSSDUP00000009324	Uncharacterized protein.	Proteasome subunit alpha type.	0.938
ENSSDUP00000006945	LOC111239148	ENSSDUP00000006945	ENSSDUP00000019291	Uncharacterized protein.	Proteasome subunit beta.	0.899
ENSSDUP00000006945	LOC111239428	ENSSDUP00000006945	ENSSDUP00000031913	Uncharacterized protein.	Proteasome subunit beta.	0.908
ENSSDUP00000006945	LOC111239429	ENSSDUP00000006945	ENSSDUP00000031910	Uncharacterized protein.	Proteasome subunit beta 12.	0.899
ENSSDUP00000006945	LOC111239430	ENSSDUP00000006945	ENSSDUP00000031905	Uncharacterized protein.	Proteasome subunit beta.	0.899