58 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSDUP00000032175	Uncharacterized protein. (119 aa)
	LOC111234378	Component of inhibitor of nuclear factor kappa B kinase complex. (734 aa)
	ENSSDUP00000004778	DDE_Tnp_1_7 domain-containing protein. (661 aa)
	ikbkg	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (564 aa)
	ENSSDUP00000018479	C2 tensin-type domain-containing protein. (284 aa)
	LOC111235327	Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (449 aa)
	LOC111228782	Ubiquitin A-52 residue ribosomal protein fusion product 1. (132 aa)
	cd3e	Ig_4 domain-containing protein. (189 aa)
	LOC111232852	Ig_4 domain-containing protein. (193 aa)
	ENSSDUP00000015999	DDE_Tnp_1_7 domain-containing protein. (552 aa)
	LOC111228710	MALT paracaspase 3. (654 aa)
	LOC111235718	DDE_Tnp_1_7 domain-containing protein. (645 aa)
	tab2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (758 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (600 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC111232180	MALT paracaspase 2. (789 aa)
	map3k7	Mitogen-activated protein kinase kinase kinase 7. (602 aa)
	LOC111220255	Protein kinase domain-containing protein. (674 aa)
	ubb	Uncharacterized protein. (153 aa)
	LOC111238330	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (308 aa)
	ENSSDUP00000008649	Ig-like domain-containing protein. (277 aa)
	LOC111224648	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	ENSSDUP00000006945	Uncharacterized protein. (267 aa)
	ENSSDUP00000004791	DDE_Tnp_1_7 domain-containing protein. (548 aa)
	LOC111228953	Protein kinase domain-containing protein. (351 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC111235530	Uncharacterized protein. (150 aa)
	pdpk1	3-phosphoinositide dependent protein kinase 1b. (565 aa)
	ENSSDUP00000002664	DDE_Tnp_1_7 domain-containing protein. (528 aa)
	LOC111237757	MALT paracaspase 1. (830 aa)
	ENSSDUP00000001508	Ig-like domain-containing protein. (129 aa)
	ENSSDUP00000001486	Uncharacterized protein. (123 aa)
	ENSSDUP00000001476	Uncharacterized protein. (259 aa)
	ENSSDUP00000001430	Ig-like domain-containing protein. (119 aa)
	ENSSDUP00000001415	Ig-like domain-containing protein. (146 aa)
	ENSSDUP00000001355	Ig-like domain-containing protein. (101 aa)
	ENSSDUP00000001336	Uncharacterized protein. (256 aa)
	ENSSDUP00000001287	IGv domain-containing protein. (136 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (318 aa)
	ENSSDUP00000024525	Ig-like domain-containing protein. (139 aa)
	ENSSDUP00000024558	Ig-like domain-containing protein. (160 aa)
	ENSSDUP00000024589	Uncharacterized protein. (124 aa)
	ube2n	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	ENSSDUP00000025274	Uncharacterized protein. (1001 aa)
	map3k20	Uncharacterized protein. (806 aa)
	ENSSDUP00000029748	Protein kinase domain-containing protein. (123 aa)
	inpp5d	Inositol polyphosphate-5-phosphatase D. (1098 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (743 aa)
	fbxw11	F-box and WD repeat domain containing 11b. (527 aa)
	LOC111239445	DDE_Tnp_1_7 domain-containing protein. (876 aa)
	ubc	Uncharacterized protein. (748 aa)
	ENSSDUP00000022352	Si:ch211-130m23.5. (676 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	ENSSDUP00000021962	DDE_Tnp_1_7 domain-containing protein. (784 aa)
	bcl10	BCL10 immune signaling adaptor. (249 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (571 aa)
	prkcq	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (719 aa)
	LOC111220177	Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (418 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000001336	cd3e	ENSSDUP00000001336	ENSSDUP00000017436	Uncharacterized protein.	Ig_4 domain-containing protein.	0.502
ENSSDUP00000001355	ENSSDUP00000001508	ENSSDUP00000001355	ENSSDUP00000001508	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.900
ENSSDUP00000001476	cd3e	ENSSDUP00000001476	ENSSDUP00000017436	Uncharacterized protein.	Ig_4 domain-containing protein.	0.502
ENSSDUP00000001508	ENSSDUP00000001355	ENSSDUP00000001508	ENSSDUP00000001355	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.900
ENSSDUP00000002664	LOC111235530	ENSSDUP00000002664	ENSSDUP00000004027	DDE_Tnp_1_7 domain-containing protein.	Uncharacterized protein.	0.854
ENSSDUP00000002664	cd3e	ENSSDUP00000002664	ENSSDUP00000017436	DDE_Tnp_1_7 domain-containing protein.	Ig_4 domain-containing protein.	0.912
ENSSDUP00000004778	LOC111235530	ENSSDUP00000004778	ENSSDUP00000004027	DDE_Tnp_1_7 domain-containing protein.	Uncharacterized protein.	0.854
ENSSDUP00000004778	cd3e	ENSSDUP00000004778	ENSSDUP00000017436	DDE_Tnp_1_7 domain-containing protein.	Ig_4 domain-containing protein.	0.912
ENSSDUP00000004791	LOC111235530	ENSSDUP00000004791	ENSSDUP00000004027	DDE_Tnp_1_7 domain-containing protein.	Uncharacterized protein.	0.854
ENSSDUP00000004791	cd3e	ENSSDUP00000004791	ENSSDUP00000017436	DDE_Tnp_1_7 domain-containing protein.	Ig_4 domain-containing protein.	0.912
ENSSDUP00000006945	LOC111228782	ENSSDUP00000006945	ENSSDUP00000018383	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.828
ENSSDUP00000006945	rps27a	ENSSDUP00000006945	ENSSDUP00000004225	Uncharacterized protein.	Ribosomal protein S27a.	0.951
ENSSDUP00000006945	uba52	ENSSDUP00000006945	ENSSDUP00000013443	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.828
ENSSDUP00000006945	ubb	ENSSDUP00000006945	ENSSDUP00000009754	Uncharacterized protein.	Uncharacterized protein.	0.877
ENSSDUP00000006945	ubc	ENSSDUP00000006945	ENSSDUP00000023286	Uncharacterized protein.	Uncharacterized protein.	0.877
ENSSDUP00000008649	cd3e	ENSSDUP00000008649	ENSSDUP00000017436	Ig-like domain-containing protein.	Ig_4 domain-containing protein.	0.502
ENSSDUP00000015999	LOC111235530	ENSSDUP00000015999	ENSSDUP00000004027	DDE_Tnp_1_7 domain-containing protein.	Uncharacterized protein.	0.854
ENSSDUP00000015999	cd3e	ENSSDUP00000015999	ENSSDUP00000017436	DDE_Tnp_1_7 domain-containing protein.	Ig_4 domain-containing protein.	0.912
ENSSDUP00000018479	LOC111228782	ENSSDUP00000018479	ENSSDUP00000018383	C2 tensin-type domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.432
ENSSDUP00000018479	rps27a	ENSSDUP00000018479	ENSSDUP00000004225	C2 tensin-type domain-containing protein.	Ribosomal protein S27a.	0.534