98 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111225043	Plexin b2a. (1868 aa)
	plxna3	Plexin A3. (1865 aa)
	LOC111237172	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
	sema6a	Semaphorin 6A; Belongs to the semaphorin family. (1020 aa)
	dstn	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (200 aa)
	LOC111222419	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1090 aa)
	RHOB	Ras homolog family member B. (143 aa)
	LOC111222406	Si:ch211-113g11.6; Belongs to the semaphorin family. (622 aa)
	LOC111223149	Sema domain-containing protein; Belongs to the semaphorin family. (1041 aa)
	LOC111233774	Uncharacterized protein. (193 aa)
	LOC111232015	Si:ch211-129c21.1; Belongs to the semaphorin family. (697 aa)
	LOC111224526	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (862 aa)
	pip5k1c	Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a. (700 aa)
	LOC111234907	Plexin A2. (1878 aa)
	LOC111218754	Talin 2a. (2542 aa)
	hsp90ab1	Heat shock protein 90, alpha (cytosolic), class B member 1. (725 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (917 aa)
	pak1	Non-specific serine/threonine protein kinase. (562 aa)
	plxna4	Plexin A4. (1915 aa)
	LOC111218442	Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
	LOC111221308	Plexin b1a. (2182 aa)
	gsk3b	Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. (421 aa)
	LOC111235557	Uncharacterized protein. (296 aa)
	arhgap35	Rho GTPase activating protein 35a. (1571 aa)
	sema6b	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (886 aa)
	LOC111223752	Cyclin-dependent kinase 5 activator. (318 aa)
	LOC111230504	Cyclin-dependent kinase 5 activator. (305 aa)
	LOC111218402	Uncharacterized protein; Belongs to the semaphorin family. (635 aa)
	LOC111238949	Dihydropyrimidinase like 5b. (586 aa)
	LOC111217069	Uncharacterized protein. (1445 aa)
	LOC111221708	Plexin b1b. (2253 aa)
	sema7a	Semaphorin 7A; Belongs to the semaphorin family. (635 aa)
	pkhd1l1	Si:ch211-244a23.1. (4208 aa)
	LOC111225358	Dihydropyrimidinase like 5a. (564 aa)
	PAK3	Non-specific serine/threonine protein kinase. (554 aa)
	LOC111235810	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (746 aa)
	LOC111235802	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (730 aa)
	LOC111220843	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
	LOC111230577	Sema domain-containing protein; Belongs to the semaphorin family. (822 aa)
	tln2	Talin 2b. (2552 aa)
	fyn	Tyrosine-protein kinase. (482 aa)
	LOC111221167	Protein tyrosine phosphatase receptor type C. (1252 aa)
	cdk5r1	Cyclin-dependent kinase 5 activator. (302 aa)
	cdk5r2	Cyclin-dependent kinase 5, regulatory subunit 2b (p39). (295 aa)
	LOC111223833	Polymeric immunoglobulin receptor. (339 aa)
	LOC111219083	Rho family GTPase 1b. (232 aa)
	LOC111228606	Sema domain-containing protein; Belongs to the semaphorin family. (836 aa)
	limk2	LIM domain kinase 2. (665 aa)
	dpysl2	Dihydropyrimidinase like 2b. (573 aa)
	PAK2	Non-specific serine/threonine protein kinase. (520 aa)
	tlnrd1	Talin rod domain containing 1. (354 aa)
	PLXND1	Plexin D1. (1900 aa)
	LOC111234595	Rho GTPase activating protein 35b. (1529 aa)
	LOC111222939	Ras homolog gene family, member Ab. (246 aa)
	tyrobp	Uncharacterized protein. (100 aa)
	LOC111228474	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (805 aa)
	sema3e	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (710 aa)
	ENSSDUP00000019293	Plexin_cytopl domain-containing protein. (281 aa)
	LOC111230678	Plexin A1a. (1895 aa)
	LOC111218955	Uncharacterized protein. (199 aa)
	LOC111225278	Tyrosine-protein kinase. (537 aa)
	LOC111230141	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
	LOC111228812	PIPK domain-containing protein. (816 aa)
	LOC111228959	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (773 aa)
	LOC111228850	Semaphorin 4e; Belongs to the semaphorin family. (803 aa)
	LOC111219782	Dihydropyrimidinase like 4. (572 aa)
	LOC111218956	Uncharacterized protein. (193 aa)
	sema3b	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (747 aa)
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (888 aa)
	sema6d	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1007 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1341 aa)
	LOC111230710	Uncharacterized protein. (193 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1364 aa)
	LOC111226036	Sema domain-containing protein; Belongs to the semaphorin family. (753 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	LOC111217057	LIM domain kinase 1b. (650 aa)
	rras	RAS related. (201 aa)
	cfl1	Cofilin 1; Belongs to the actin-binding proteins ADF family. (167 aa)
	rock2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1398 aa)
	PLXNA2	Plexin A2. (1911 aa)
	LOC111235431	Plexin B3. (1899 aa)
	LOC111234358	Dihydropyrimidinase like 3. (684 aa)
	LOC111233707	Uncharacterized protein; Belongs to the semaphorin family. (729 aa)
	LOC111228045	LIM domain kinase 1a. (675 aa)
	arhgef12	Rho guanine nucleotide exchange factor (GEF) 12a. (1438 aa)
	DPYSL2	Dihydropyrimidinase like 2. (547 aa)
	tln1	Talin 1. (2276 aa)
	ENSSDUP00000029534	FERM domain-containing protein. (316 aa)
	LOC111219488	Ras homolog family member Ca. (193 aa)
	LOC111232004	Zgc:103559. (454 aa)
	LOC111231443	Collapsin response mediator protein 1. (677 aa)
	farp2	FERM, RhoGEF and pleckstrin domain protein 2. (1064 aa)
	RND1	Rho family GTPase 1. (232 aa)
	pak2	Non-specific serine/threonine protein kinase. (530 aa)
	plxna1	Sema domain-containing protein. (1890 aa)
	erbb2	Receptor protein-tyrosine kinase. (1292 aa)
	plxnb2	Plexin b2b. (1829 aa)
	sema3g	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (787 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DPYSL2	cdk5	ENSSDUP00000029493	ENSSDUP00000024088	Dihydropyrimidinase like 2.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.537
DPYSL2	met	ENSSDUP00000029493	ENSSDUP00000022877	Dihydropyrimidinase like 2.	MET proto-oncogene, receptor tyrosine kinase.	0.440
ENSSDUP00000019293	LOC111217069	ENSSDUP00000019293	ENSSDUP00000011276	Plexin_cytopl domain-containing protein.	Uncharacterized protein.	0.413
ENSSDUP00000019293	LOC111218402	ENSSDUP00000019293	ENSSDUP00000010575	Plexin_cytopl domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.720
ENSSDUP00000019293	LOC111218442	ENSSDUP00000019293	ENSSDUP00000005624	Plexin_cytopl domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.501
ENSSDUP00000019293	LOC111219083	ENSSDUP00000019293	ENSSDUP00000015453	Plexin_cytopl domain-containing protein.	Rho family GTPase 1b.	0.407
ENSSDUP00000019293	LOC111222406	ENSSDUP00000019293	ENSSDUP00000002782	Plexin_cytopl domain-containing protein.	Si:ch211-113g11.6; Belongs to the semaphorin family.	0.584
ENSSDUP00000019293	LOC111222419	ENSSDUP00000019293	ENSSDUP00000002164	Plexin_cytopl domain-containing protein.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	0.496
ENSSDUP00000019293	LOC111223149	ENSSDUP00000019293	ENSSDUP00000002909	Plexin_cytopl domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.496
ENSSDUP00000019293	LOC111224526	ENSSDUP00000019293	ENSSDUP00000003981	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family.	0.540
ENSSDUP00000019293	LOC111226036	ENSSDUP00000019293	ENSSDUP00000023631	Plexin_cytopl domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.523
ENSSDUP00000019293	LOC111228474	ENSSDUP00000019293	ENSSDUP00000018892	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family.	0.540
ENSSDUP00000019293	LOC111228606	ENSSDUP00000019293	ENSSDUP00000015698	Plexin_cytopl domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.501
ENSSDUP00000019293	LOC111228850	ENSSDUP00000019293	ENSSDUP00000020936	Plexin_cytopl domain-containing protein.	Semaphorin 4e; Belongs to the semaphorin family.	0.523
ENSSDUP00000019293	LOC111228959	ENSSDUP00000019293	ENSSDUP00000020760	Plexin_cytopl domain-containing protein.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family.	0.438
ENSSDUP00000019293	LOC111230577	ENSSDUP00000019293	ENSSDUP00000013513	Plexin_cytopl domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.501
ENSSDUP00000019293	LOC111232015	ENSSDUP00000019293	ENSSDUP00000003785	Plexin_cytopl domain-containing protein.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.523
ENSSDUP00000019293	LOC111233707	ENSSDUP00000019293	ENSSDUP00000028145	Plexin_cytopl domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.501
ENSSDUP00000019293	RND1	ENSSDUP00000019293	ENSSDUP00000031269	Plexin_cytopl domain-containing protein.	Rho family GTPase 1.	0.407
ENSSDUP00000019293	SEMA4D	ENSSDUP00000019293	ENSSDUP00000021853	Plexin_cytopl domain-containing protein.	Semaphorin 4D; Belongs to the semaphorin family.	0.596