STRINGSTRING
pak2 pak2 PAK3 PAK3 LOC111235810 LOC111235810 LOC111235802 LOC111235802 fyn fyn limk2 limk2 PAK2 PAK2 LOC111228474 LOC111228474 LOC111230678 LOC111230678 LOC111225278 LOC111225278 sema3b sema3b LOC111217057 LOC111217057 cfl1 cfl1 PLXNA2 PLXNA2 LOC111228045 LOC111228045 LOC111237172 LOC111237172 plxna3 plxna3 plxna4 plxna4 plxna1 plxna1 LOC111234907 LOC111234907 LOC111224526 LOC111224526 dstn dstn hsp90ab1 hsp90ab1 nrp1 nrp1 pak1 pak1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pak2Non-specific serine/threonine protein kinase. (530 aa)
PAK3Non-specific serine/threonine protein kinase. (554 aa)
LOC111235810Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (746 aa)
LOC111235802Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (730 aa)
fynTyrosine-protein kinase. (482 aa)
limk2LIM domain kinase 2. (665 aa)
PAK2Non-specific serine/threonine protein kinase. (520 aa)
LOC111228474Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (805 aa)
LOC111230678Plexin A1a. (1895 aa)
LOC111225278Tyrosine-protein kinase. (537 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (747 aa)
LOC111217057LIM domain kinase 1b. (650 aa)
cfl1Cofilin 1; Belongs to the actin-binding proteins ADF family. (167 aa)
PLXNA2Plexin A2. (1911 aa)
LOC111228045LIM domain kinase 1a. (675 aa)
LOC111237172Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
plxna3Plexin A3. (1865 aa)
plxna4Plexin A4. (1915 aa)
plxna1Sema domain-containing protein. (1890 aa)
LOC111234907Plexin A2. (1878 aa)
LOC111224526Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (862 aa)
dstnADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (200 aa)
hsp90ab1Heat shock protein 90, alpha (cytosolic), class B member 1. (725 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (917 aa)
pak1Non-specific serine/threonine protein kinase. (562 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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