149 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSDUP00000023762	NACHT domain-containing protein. (785 aa)
	tonsl	Tonsoku-like, DNA repair protein. (1445 aa)
	rela	V-rel avian reticuloendotheliosis viral oncogene homolog A. (632 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (318 aa)
	REL	REL proto-oncogene, NF-kB subunit. (658 aa)
	ube2n	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	ENSSDUP00000033161	Uncharacterized protein. (76 aa)
	ENSSDUP00000032765	NACHT domain-containing protein. (1066 aa)
	LOC111217845	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (598 aa)
	LOC111234378	Component of inhibitor of nuclear factor kappa B kinase complex. (734 aa)
	nkiras2	NFKB inhibitor interacting Ras-like 2. (192 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (743 aa)
	ENSSDUP00000031128	Uncharacterized protein. (635 aa)
	LOC111230836	Uncharacterized protein. (975 aa)
	LOC111239418	Uncharacterized protein. (753 aa)
	ENSSDUP00000029923	NACHT domain-containing protein. (865 aa)
	ENSSDUP00000029878	NLRC4_HD2 domain-containing protein. (318 aa)
	LOC111225312	Uncharacterized protein. (1028 aa)
	LOC111226132	Uncharacterized protein. (979 aa)
	ENSSDUP00000029778	Uncharacterized protein. (930 aa)
	map3k20	Uncharacterized protein. (806 aa)
	n4bp1	Nedd4 binding protein 1. (991 aa)
	ENSSDUP00000022394	Si:dkey-28k24.2. (823 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	ENSSDUP00000022031	Uncharacterized protein. (64 aa)
	ENSSDUP00000022026	Uncharacterized protein. (953 aa)
	ENSSDUP00000021940	NACHT domain-containing protein. (588 aa)
	ENSSDUP00000021790	Uncharacterized protein. (393 aa)
	ENSSDUP00000021682	Uncharacterized protein. (845 aa)
	nfkb1	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1. (826 aa)
	LOC111231701	Uncharacterized protein. (1028 aa)
	s100b	S100 calcium binding protein, beta (neural); Belongs to the S-100 family. (103 aa)
	ENSSDUP00000021249	Uncharacterized protein. (984 aa)
	LOC111231698	Uncharacterized protein. (975 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (571 aa)
	ENSSDUP00000021095	NACHT domain-containing protein. (786 aa)
	ENSSDUP00000020994	EF-hand domain-containing protein. (467 aa)
	ENSSDUP00000020977	NACHT domain-containing protein. (638 aa)
	hmgb1	High mobility group box 1a. (206 aa)
	ENSSDUP00000020201	Uncharacterized protein. (946 aa)
	ENSSDUP00000019917	Uncharacterized protein. (951 aa)
	LOC111228953	Protein kinase domain-containing protein. (351 aa)
	LOC111238600	KH and NYN domain containing. (988 aa)
	ENSSDUP00000019578	Uncharacterized protein. (105 aa)
	ikbkg	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (564 aa)
	LOC111228782	Ubiquitin A-52 residue ribosomal protein fusion product 1. (132 aa)
	ENSSDUP00000018000	B30.2/SPRY domain-containing protein. (343 aa)
	ENSSDUP00000017983	B30.2/SPRY domain-containing protein. (315 aa)
	ENSSDUP00000017597	Uncharacterized protein. (921 aa)
	APP	Amyloid beta precursor protein. (787 aa)
	LOC111234320	NACHT domain-containing protein. (766 aa)
	nkiras1	NFKB inhibitor interacting Ras-like 1. (192 aa)
	ENSSDUP00000015800	NACHT domain-containing protein. (874 aa)
	LOC111235776	Basal cell adhesion molecule (Lutheran blood group). (604 aa)
	LOC111240150	Uncharacterized protein. (935 aa)
	LOC111238379	Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (121 aa)
	LOC111220255	Protein kinase domain-containing protein. (674 aa)
	nlrx1	NLR family member X1. (977 aa)
	LOC111222653	Uncharacterized protein. (929 aa)
	ENSSDUP00000010167	Uncharacterized protein. (974 aa)
	LOC111237877	Si:ch73-174h16.4. (556 aa)
	ubb	Uncharacterized protein. (153 aa)
	ENSSDUP00000009564	NACHT domain-containing protein. (625 aa)
	LOC111238330	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (308 aa)
	LOC111231189	Uncharacterized protein. (1371 aa)
	ENSSDUP00000008895	B30.2/SPRY domain-containing protein. (343 aa)
	LOC111229789	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
	LOC111224648	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	LOC111229963	EF-hand domain-containing protein. (107 aa)
	LOC111218784	Amyloid beta (A4) precursor protein b. (755 aa)
	ENSSDUP00000015750	NACHT domain-containing protein. (962 aa)
	LOC111240050	Uncharacterized protein. (994 aa)
	ENSSDUP00000006798	Uncharacterized protein. (1015 aa)
	ENSSDUP00000006773	Uncharacterized protein. (967 aa)
	LOC111217937	NACHT domain-containing protein. (930 aa)
	casp8	Uncharacterized protein; Belongs to the peptidase C14A family. (482 aa)
	ENSSDUP00000005602	Uncharacterized protein. (988 aa)
	LOC111240015	Uncharacterized protein. (981 aa)
	ENSSDUP00000005447	Uncharacterized protein. (766 aa)
	ENSSDUP00000005411	Uncharacterized protein. (441 aa)
	ENSSDUP00000015742	Uncharacterized protein. (909 aa)
	ENSSDUP00000015598	NACHT domain-containing protein. (944 aa)
	ENSSDUP00000015380	Uncharacterized protein. (585 aa)
	LOC111224459	High mobility group box 1b. (199 aa)
	ENSSDUP00000015191	Uncharacterized protein. (720 aa)
	ENSSDUP00000014872	NACHT domain-containing protein. (659 aa)
	LOC111233305	Uncharacterized protein. (937 aa)
	LOC111237168	Uncharacterized protein. (1027 aa)
	ENSSDUP00000000658	Uncharacterized protein. (1033 aa)
	LOC111224119	Pyrin domain-containing protein. (781 aa)
	ikbip	Uncharacterized protein. (370 aa)
	ENSSDUP00000001574	Uncharacterized protein. (964 aa)
	LOC111220363	Si:ch211-183d21.1. (924 aa)
	LOC111219638	NLR family, CARD domain containing 3. (937 aa)
	LOC111219799	NLR family CARD domain-containing protein 3-like. (1070 aa)
	LOC111236170	Uncharacterized protein. (1006 aa)
	ENSSDUP00000002520	Uncharacterized protein. (999 aa)
	ENSSDUP00000002608	Uncharacterized protein. (951 aa)
	LOC111238362	Uncharacterized protein. (977 aa)
	ENSSDUP00000003268	B30.2/SPRY domain-containing protein. (283 aa)
	tab3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (618 aa)
	LOC111229667	Uncharacterized protein. (947 aa)
	ENSSDUP00000004075	Uncharacterized protein. (955 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC111221611	EF-hand domain-containing protein. (104 aa)
	nfkb2	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100). (905 aa)
	ENSSDUP00000005080	Uncharacterized protein. (990 aa)
	lrrc74a	Leucine rich repeat containing 74A. (625 aa)
	lrrc31	Leucine rich repeat containing 31. (575 aa)
	lrrc34	Leucine rich repeat containing 34. (419 aa)
	ENSSDUP00000023307	Uncharacterized protein. (131 aa)
	ENSSDUP00000023736	Uncharacterized protein. (94 aa)
	tab2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (758 aa)
	lrrc71	Si:ch211-81a5.5. (494 aa)
	ENSSDUP00000025422	NACHT domain-containing protein. (942 aa)
	ENSSDUP00000025443	NACHT domain-containing protein. (729 aa)
	ENSSDUP00000025509	Uncharacterized protein. (896 aa)
	ENSSDUP00000025824	Uncharacterized protein. (1003 aa)
	ENSSDUP00000025881	Uncharacterized protein. (929 aa)
	ENSSDUP00000025954	Pyrin domain-containing protein. (840 aa)
	ENSSDUP00000025972	Uncharacterized protein. (921 aa)
	ENSSDUP00000025973	B30.2/SPRY domain-containing protein. (187 aa)
	ENSSDUP00000025987	B30.2/SPRY domain-containing protein. (209 aa)
	vwc2	Von Willebrand factor C domain containing 2. (310 aa)
	usp18	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family. (340 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (738 aa)
	ENSSDUP00000028030	Uncharacterized protein. (954 aa)
	ENSSDUP00000028053	Uncharacterized protein. (950 aa)
	LOC111233125	Uncharacterized protein. (980 aa)
	ENSSDUP00000028109	NACHT domain-containing protein. (534 aa)
	LOC111233312	Uncharacterized protein. (1009 aa)
	ENSSDUP00000028248	Uncharacterized protein. (842 aa)
	ENSSDUP00000029030	B30.2/SPRY domain-containing protein. (221 aa)
	NLRC5	NLR family CARD domain containing 5. (1862 aa)
	ENSSDUP00000029326	NACHT domain-containing protein. (663 aa)
	ENSSDUP00000029361	NACHT domain-containing protein. (844 aa)
	LOC111231876	Uncharacterized protein. (893 aa)
	ENSSDUP00000014424	Uncharacterized protein. (418 aa)
	ENSSDUP00000014130	Uncharacterized protein. (627 aa)
	LOC111240290	Uncharacterized protein. (962 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	ENSSDUP00000013309	Uncharacterized protein. (141 aa)
	ubc	Uncharacterized protein. (748 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (470 aa)
	ENSSDUP00000022700	Uncharacterized protein. (387 aa)
	ENSSDUP00000022654	Uncharacterized protein. (439 aa)
	lrrc45	Leucine rich repeat containing 45. (674 aa)
	ENSSDUP00000033164	Uncharacterized protein. (913 aa)
	ENSSDUP00000033053	NACHT domain-containing protein. (535 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APP	nfkb1	ENSSDUP00000017469	ENSSDUP00000021573	Amyloid beta precursor protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	0.482
APP	nfkb2	ENSSDUP00000017469	ENSSDUP00000005069	Amyloid beta precursor protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).	0.482
APP	s100b	ENSSDUP00000017469	ENSSDUP00000021280	Amyloid beta precursor protein.	S100 calcium binding protein, beta (neural); Belongs to the S-100 family.	0.496
LOC111217845	LOC111220255	ENSSDUP00000032740	ENSSDUP00000011604	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Protein kinase domain-containing protein.	0.562
LOC111217845	LOC111224648	ENSSDUP00000032740	ENSSDUP00000008102	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.554
LOC111217845	LOC111228782	ENSSDUP00000032740	ENSSDUP00000018383	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.576
LOC111217845	LOC111228953	ENSSDUP00000032740	ENSSDUP00000019702	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Protein kinase domain-containing protein.	0.486
LOC111217845	LOC111234378	ENSSDUP00000032740	ENSSDUP00000032181	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.658
LOC111217845	NLRC5	ENSSDUP00000032740	ENSSDUP00000029198	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	NLR family CARD domain containing 5.	0.400
LOC111217845	casp8	ENSSDUP00000032740	ENSSDUP00000006651	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.861
LOC111217845	ikbkb	ENSSDUP00000032740	ENSSDUP00000031936	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.658
LOC111217845	ikbkg	ENSSDUP00000032740	ENSSDUP00000019238	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.457
LOC111217845	irak1	ENSSDUP00000032740	ENSSDUP00000027344	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Interleukin-1 receptor-associated kinase 1.	0.477
LOC111217845	map3k20	ENSSDUP00000032740	ENSSDUP00000029705	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Uncharacterized protein.	0.486
LOC111217845	rps27a	ENSSDUP00000032740	ENSSDUP00000004225	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Ribosomal protein S27a.	0.752
LOC111217845	tab2	ENSSDUP00000032740	ENSSDUP00000014446	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.845
LOC111217845	tab3	ENSSDUP00000032740	ENSSDUP00000003546	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.866
LOC111217845	traf6	ENSSDUP00000032740	ENSSDUP00000021100	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.850
LOC111217845	uba52	ENSSDUP00000032740	ENSSDUP00000013443	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.576
LOC111217845	ubb	ENSSDUP00000032740	ENSSDUP00000009754	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Uncharacterized protein.	0.577