22 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ebi3	Epstein-Barr virus induced 3. (257 aa)
	jak1	Tyrosine-protein kinase. (1155 aa)
	LOC111226679	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (319 aa)
	stat1	Signal transducer and activator of transcription. (765 aa)
	p4hb	Protein disulfide-isomerase. (517 aa)
	LOC111223632	BolA family member 2; Belongs to the BolA/IbaG family. (86 aa)
	LOC111232050	Interleukin 12 receptor, beta 2a. (765 aa)
	ENSSDUP00000003185	Uncharacterized protein. (552 aa)
	LOC111217911	Uncharacterized protein. (741 aa)
	il10	Interleukin 10. (187 aa)
	LOC111227308	Uncharacterized protein. (711 aa)
	dstn	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (200 aa)
	LOC111237172	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
	LOC111236466	Tyrosine-protein kinase. (1114 aa)
	LOC111236541	Uncharacterized protein. (884 aa)
	il6st	Uncharacterized protein. (893 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (320 aa)
	cfl1	Cofilin 1; Belongs to the actin-binding proteins ADF family. (167 aa)
	LOC111216626	Protein disulfide-isomerase. (577 aa)
	stat3	Signal transducer and activator of transcription. (783 aa)
	jak2	Tyrosine-protein kinase. (1133 aa)
	canx	Calnexin. (624 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000003185	IL12B	ENSSDUP00000003185	ENSSDUP00000027855	Uncharacterized protein.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.921
ENSSDUP00000003185	LOC111232050	ENSSDUP00000003185	ENSSDUP00000003206	Uncharacterized protein.	Interleukin 12 receptor, beta 2a.	0.928
ENSSDUP00000003185	LOC111236466	ENSSDUP00000003185	ENSSDUP00000032116	Uncharacterized protein.	Tyrosine-protein kinase.	0.597
ENSSDUP00000003185	il10	ENSSDUP00000003185	ENSSDUP00000003040	Uncharacterized protein.	Interleukin 10.	0.606
ENSSDUP00000003185	jak1	ENSSDUP00000003185	ENSSDUP00000017855	Uncharacterized protein.	Tyrosine-protein kinase.	0.597
ENSSDUP00000003185	jak2	ENSSDUP00000003185	ENSSDUP00000022125	Uncharacterized protein.	Tyrosine-protein kinase.	0.597
ENSSDUP00000003185	stat1	ENSSDUP00000003185	ENSSDUP00000010782	Uncharacterized protein.	Signal transducer and activator of transcription.	0.490
ENSSDUP00000003185	stat3	ENSSDUP00000003185	ENSSDUP00000023515	Uncharacterized protein.	Signal transducer and activator of transcription.	0.490
IL12B	ENSSDUP00000003185	ENSSDUP00000027855	ENSSDUP00000003185	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Uncharacterized protein.	0.921
IL12B	LOC111232050	ENSSDUP00000027855	ENSSDUP00000003206	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Interleukin 12 receptor, beta 2a.	0.905
LOC111216626	LOC111217911	ENSSDUP00000024121	ENSSDUP00000003096	Protein disulfide-isomerase.	Uncharacterized protein.	0.690
LOC111216626	canx	ENSSDUP00000024121	ENSSDUP00000019485	Protein disulfide-isomerase.	Calnexin.	0.690
LOC111217911	LOC111216626	ENSSDUP00000003096	ENSSDUP00000024121	Uncharacterized protein.	Protein disulfide-isomerase.	0.690
LOC111217911	LOC111227308	ENSSDUP00000003096	ENSSDUP00000002489	Uncharacterized protein.	Uncharacterized protein.	0.515
LOC111217911	ebi3	ENSSDUP00000003096	ENSSDUP00000018198	Uncharacterized protein.	Epstein-Barr virus induced 3.	0.625
LOC111217911	p4hb	ENSSDUP00000003096	ENSSDUP00000005327	Uncharacterized protein.	Protein disulfide-isomerase.	0.690
LOC111226679	il10	ENSSDUP00000013910	ENSSDUP00000003040	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Interleukin 10.	0.430
LOC111227308	LOC111217911	ENSSDUP00000002489	ENSSDUP00000003096	Uncharacterized protein.	Uncharacterized protein.	0.515
LOC111227308	canx	ENSSDUP00000002489	ENSSDUP00000019485	Uncharacterized protein.	Calnexin.	0.603
LOC111227308	ebi3	ENSSDUP00000002489	ENSSDUP00000018198	Uncharacterized protein.	Epstein-Barr virus induced 3.	0.667