STRINGSTRING
kxd1 kxd1 cftr cftr ENSSDUP00000022591 ENSSDUP00000022591 LOC111230200 LOC111230200 ENSSDUP00000022690 ENSSDUP00000022690 tomm6 tomm6 ubc ubc LOC111233537 LOC111233537 MAP1LC3A MAP1LC3A LOC111236255 LOC111236255 LOC111225571 LOC111225571 ube2n ube2n LOC111234759 LOC111234759 LOC111234760 LOC111234760 ENSSDUP00000025491 ENSSDUP00000025491 LOC111234751 LOC111234751 LOC111233582 LOC111233582 LOC111232948 LOC111232948 ILRUN ILRUN LOC111223933 LOC111223933 LOC111223428 LOC111223428 LOC111223575 LOC111223575 hdac6 hdac6 LOC111225231 LOC111225231 LOC111231260 LOC111231260 vdac1 vdac1 LOC111218614 LOC111218614 ulk1 ulk1 ulk2 ulk2 LOC111231860 LOC111231860 LOC111236438 LOC111236438 uba52 uba52 tomm40 tomm40 pink1 pink1 LOC111229229 LOC111229229 LOC111234381 LOC111234381 LOC111234450 LOC111234450 LOC111221326 LOC111221326 LOC111235128 LOC111235128 ENSSDUP00000007396 ENSSDUP00000007396 LOC111234965 LOC111234965 LOC111234966 LOC111234966 arl13b arl13b LOC111224648 LOC111224648 DYNC1I1 DYNC1I1 LOC111237326 LOC111237326 ENSSDUP00000008186 ENSSDUP00000008186 cetn3 cetn3 ENSSDUP00000009213 ENSSDUP00000009213 dync1li2 dync1li2 ubb ubb TOMM7 TOMM7 LOC111230604 LOC111230604 LOC111220880 LOC111220880 tube1 tube1 LOC111219998 LOC111219998 DYNLL2 DYNLL2 fndc3b fndc3b atm atm LOC111233470 LOC111233470 usp30 usp30 FUNDC1 FUNDC1 fndc3a fndc3a prkn prkn pex5 pex5 LOC111228782 LOC111228782 fundc1 fundc1 LOC111234054 LOC111234054 LOC111234029 LOC111234029 ift88 ift88 AKAP9 AKAP9 LOC111229179 LOC111229179 LOC111225811 LOC111225811 LOC111230072 LOC111230072 vim vim LOC111227125 LOC111227125 LOC111218500 LOC111218500 ENSSDUP00000020313 ENSSDUP00000020313 park7 park7 sqstm1 sqstm1 atg12 atg12 LOC111221676 LOC111221676 LOC111221678 LOC111221678 tomm22 tomm22 LOC111232466 LOC111232466 LOC111223011 LOC111223011 LOC111237171 LOC111237171 mfn2 mfn2 LOC111234930 LOC111234930 pgam5 pgam5 atg5 atg5 tomm70 tomm70 pex5l pex5l TOMM20 TOMM20 csnk2a2 csnk2a2 rps27a rps27a tomm5 tomm5 mterf3 mterf3 LOC111228817 LOC111228817 mfn1 mfn1 LOC111234898 LOC111234898
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kxd1KxDL motif containing 1. (184 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1511 aa)
ENSSDUP00000022591Tubulin domain-containing protein. (150 aa)
LOC111230200Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (452 aa)
ENSSDUP00000022690Tubulin domain-containing protein. (83 aa)
tomm6Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
ubcUncharacterized protein. (748 aa)
LOC111233537Tyrosine-protein kinase. (550 aa)
MAP1LC3AMicrotubule-associated protein 1 light chain 3 alpha. (121 aa)
LOC111236255PB1 domain-containing protein. (1077 aa)
LOC111225571Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
ube2nUbiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
LOC111234759Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC111234760Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (480 aa)
ENSSDUP00000025491Tubulin_C domain-containing protein. (130 aa)
LOC111234751Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111233582Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)
LOC111232948Translocase of outer mitochondrial membrane 20b. (146 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (293 aa)
LOC111223933Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (183 aa)
LOC111223428Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
LOC111223575Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (333 aa)
hdac6Histone deacetylase 6. (1115 aa)
LOC111225231Microtubule-associated protein 1 light chain 3 beta. (126 aa)
LOC111231260Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
vdac1Voltage-dependent anion channel 1. (371 aa)
LOC111218614Dynein, cytoplasmic 1, intermediate chain 2a. (627 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1027 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1042 aa)
LOC111231860Unc-51 like autophagy activating kinase 1a. (921 aa)
LOC111236438Dynein light chain. (89 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
tomm40Translocase of outer mitochondrial membrane 40 homolog (yeast). (342 aa)
pink1PTEN induced kinase 1. (575 aa)
LOC111229229Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
LOC111234381Dynein light chain. (89 aa)
LOC111234450Uncharacterized protein. (331 aa)
LOC111221326Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111235128Tyrosine-protein kinase. (543 aa)
ENSSDUP00000007396Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (312 aa)
LOC111234965Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111234966Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (485 aa)
arl13bADP-ribosylation factor-like 13b. (400 aa)
LOC111224648UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (610 aa)
LOC111237326Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (718 aa)
ENSSDUP00000008186Peroxisomal biogenesis factor 5-like b. (403 aa)
cetn3Centrin 3. (167 aa)
ENSSDUP00000009213GSAP-16 domain-containing protein. (162 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (492 aa)
ubbUncharacterized protein. (153 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (55 aa)
LOC111230604Translocase of outer mitochondrial membrane 40 homolog, like. (341 aa)
LOC111220880Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
tube1Tubulin, epsilon 1; Belongs to the tubulin family. (474 aa)
LOC111219998NBR1 autophagy cargo receptor a. (1079 aa)
DYNLL2Dynein light chain. (89 aa)
fndc3bFibronectin type III domain containing 3Ba. (1210 aa)
atmNon-specific serine/threonine protein kinase. (2999 aa)
LOC111233470Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (519 aa)
FUNDC1FUN14 domain containing 1. (225 aa)
fndc3aFibronectin type III domain containing 3A. (1241 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (463 aa)
pex5Peroxisomal biogenesis factor 5. (598 aa)
LOC111228782Ubiquitin A-52 residue ribosomal protein fusion product 1. (132 aa)
fundc1Uncharacterized protein. (169 aa)
LOC111234054Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
LOC111234029Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
ift88Intraflagellar transport 88 homolog. (824 aa)
AKAP9A-kinase anchoring protein 9. (3000 aa)
LOC111229179Dynein, cytoplasmic 1, intermediate chain 2b. (634 aa)
LOC111225811Pericentrin. (3597 aa)
LOC111230072Tubulin domain-containing protein. (161 aa)
vimVimentin like; Belongs to the intermediate filament family. (455 aa)
LOC111227125Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (524 aa)
LOC111218500Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
ENSSDUP00000020313Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (435 aa)
park7Parkinson protein 7. (189 aa)
sqstm1Sequestosome 1. (413 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
LOC111221676Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (363 aa)
LOC111221678Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (340 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (133 aa)
LOC111232466Centrin 4. (171 aa)
LOC111223011Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (491 aa)
LOC111237171Zgc:109986. (300 aa)
mfn2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (711 aa)
LOC111234930Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
pgam5PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (305 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
pex5lPeroxisomal biogenesis factor 5-like a. (633 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (146 aa)
csnk2a2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (350 aa)
rps27aRibosomal protein S27a. (156 aa)
tomm5Translocase of outer mitochondrial membrane 5 homolog (yeast). (48 aa)
mterf3Mitochondrial transcription termination factor 3. (426 aa)
LOC111228817Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (437 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)
LOC111234898Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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