STRINGSTRING
ABX20618.1 ABX20618.1 ABX21019.1 ABX21019.1 ghrA ghrA ABX22849.1 ABX22849.1 dsdA dsdA ABX23787.1 ABX23787.1 gph gph ABX24153.1 ABX24153.1 ABX24157.1 ABX24157.1 ABX24456.1 ABX24456.1 ABX24457.1 ABX24457.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABX20618.1Hypothetical protein; KEGG: sec:SC2212 1.3e-227 sdhL; putative D-serine dehydratase K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (433 aa)
ABX21019.1Hypothetical protein; KEGG: stt:t1051 3.0e-242 sdaA; L-serine deaminase 1 K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (473 aa)
ghrAHypothetical protein; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. (312 aa)
ABX22849.1Hypothetical protein; KEGG: stm:STM4578 6.1e-164 serB; 3-phosphoserine phosphatase K01079; COG: COG0560 Phosphoserine phosphatase. (340 aa)
dsdAHypothetical protein; KEGG: sec:SC3724 6.0e-228 dsdA; D-serine deaminase (dehydratase) K01753; COG: COG3048 D-serine dehydratase; Psort location: Cytoplasmic, score:8.96. (440 aa)
ABX23787.1Hypothetical protein; KEGG: sec:SC3578 5.5e-76 yiaE; 2-keto-D-gluconate reductase K00090; COG: COG1052 Lactate dehydrogenase and related dehydrogenases; Psort location: Cytoplasmic, score:9.97. (164 aa)
gphHypothetical protein; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (252 aa)
ABX24153.1Hypothetical protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (329 aa)
ABX24157.1Hypothetical protein; KEGG: spt:SPA3109 1.4e-230 tdcG; L-serine dehydratase K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
ABX24456.1Hypothetical protein; KEGG: stm:STM2971 9.4e-239 sdaB; L-serine dehydratase (L-threonine deaminase 2) K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa)
ABX24457.1Hypothetical protein; COG: COG0814 Amino acid permeases; Psort location: CytoplasmicMembrane, score:10.00. (429 aa)
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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