STRINGSTRING
luxS luxS ABX20256.1 ABX20256.1 ABX20257.1 ABX20257.1 ABX20258.1 ABX20258.1 ABX20260.1 ABX20260.1 ABX20612.1 ABX20612.1 ABX20856.1 ABX20856.1 ABX20857.1 ABX20857.1 ABX22112.1 ABX22112.1 potE potE ABX22114.1 ABX22114.1 ABX22616.1 ABX22616.1 ABX22617.1 ABX22617.1 mtnN mtnN speE speE speD speD ABX22973.1 ABX22973.1 ABX23193.1 ABX23193.1 ABX24305.1 ABX24305.1 metK metK speA speA ABX24333.1 ABX24333.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
luxSHypothetical protein; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. (171 aa)
ABX20256.1Hypothetical protein; KEGG: stt:t0297 0. cadA; lysine decarboxylase K01582; COG: COG1982 Arginine/lysine/ornithine decarboxylases. (714 aa)
ABX20257.1Hypothetical protein; KEGG: eci:UTI89_C0120 4.2e-10 aroP; aromatic amino acid transport protein AroP K03293; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score:10.00. (445 aa)
ABX20258.1Hypothetical protein; KEGG: rle:RL2429 9.6e-10 cya; putative adenylate cyclase K01768; COG: COG3710 DNA-binding winged-HTH domains. (512 aa)
ABX20260.1Hypothetical protein. (43 aa)
ABX20612.1Hypothetical protein; KEGG: eci:UTI89_C0120 9.8e-70 aroP; aromatic amino acid transport protein AroP K03293; COG: COG0833 Amino acid transporters; Psort location: CytoplasmicMembrane, score:10.00. (489 aa)
ABX20856.1Hypothetical protein; KEGG: stm:STM1992 8.7e-252 dcm; DNA cytosine methylase K00558; COG: COG0270 Site-specific DNA methylase; Psort location: Cytoplasmic, score:8.96. (476 aa)
ABX20857.1Hypothetical protein; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. (156 aa)
ABX22112.1Hypothetical protein; KEGG: stm:STM0701 0. speF; ornithine decarboxylase isozyme K01581; COG: COG1982 Arginine/lysine/ornithine decarboxylases; Psort location: Cytoplasmic, score:8.96. (732 aa)
potEHypothetical protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. (439 aa)
ABX22114.1Hypothetical protein; COG: COG3467 Predicted flavin-nucleotide-binding protein; Psort location: Cytoplasmic, score:8.96. (161 aa)
ABX22616.1Hypothetical protein; KEGG: stm:STM0235 3.9e-66 yaeR; putative lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases; Psort location: Cytoplasmic, score:8.96. (142 aa)
ABX22617.1Hypothetical protein; KEGG: sec:SC0234 0. ldcC; lysine decarboxylase 2, constitutive K01582; COG: COG1982 Arginine/lysine/ornithine decarboxylases; Psort location: Cytoplasmic, score:8.96. (713 aa)
mtnNHypothetical protein; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulation. Belongs to the PNP/UDP phosphorylas [...] (232 aa)
speEHypothetical protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (286 aa)
speDHypothetical protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily. (264 aa)
ABX22973.1Hypothetical protein; KEGG: plu:plu0338 2.1e-193 dcm; DNA-cytosine methyltransferase K00558; COG: COG0270 Site-specific DNA methylase; Psort location: Cytoplasmic, score:8.96. (474 aa)
ABX23193.1Hypothetical protein; KEGG: sty:STY4495 0. adi; arginine decarboxylase K01584; COG: COG1982 Arginine/lysine/ornithine decarboxylases. (756 aa)
ABX24305.1Hypothetical protein; KEGG: stm:STM3114 0. speC; ornithine decarboxylase isozyme K01581; COG: COG1982 Arginine/lysine/ornithine decarboxylases. (711 aa)
metKHypothetical protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (384 aa)
speAHypothetical protein; Catalyzes the biosynthesis of agmatine from arginine. (637 aa)
ABX24333.1Hypothetical protein; KEGG: spt:SPA2949 1.9e-153 speB; agmatine ureohydrolase K01480; COG: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Psort location: Cytoplasmic, score:8.96; Belongs to the arginase family. (283 aa)
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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