STRINGSTRING
ABX21057.1 ABX21057.1 ABX21019.1 ABX21019.1 edd edd ABX20753.1 ABX20753.1 ABX20741.1 ABX20741.1 ABX20667.1 ABX20667.1 ABX20618.1 ABX20618.1 napA napA napF napF nuoI nuoI ABX20502.1 ABX20502.1 ABX20501.1 ABX20501.1 ABX20500.1 ABX20500.1 nuoB nuoB queG queG ABX23124.1 ABX23124.1 ABX23132.1 ABX23132.1 ABX23174.1 ABX23174.1 ABX23179.1 ABX23179.1 ABX23209.1 ABX23209.1 thiC thiC ABX23324.1 ABX23324.1 ABX23442.1 ABX23442.1 ABX23467.1 ABX23467.1 ABX23496.1 ABX23496.1 ilvD ilvD nfuA nfuA feoC feoC ABX23929.1 ABX23929.1 ABX24157.1 ABX24157.1 ygiQ ygiQ ABX20349.1 ABX20349.1 ispG ispG rlmN rlmN ABX20285.1 ABX20285.1 iscS iscS iscR iscR ABX20267.1 ABX20267.1 ABX20266.1 ABX20266.1 cysI cysI queE queE rlmD rlmD rimO rimO dinG dinG moaA moaA ABX21406.1 ABX21406.1 bioB bioB nadA nadA ABX22077.1 ABX22077.1 ABX22085.1 ABX22085.1 miaB miaB lipA lipA ABX22428.1 ABX22428.1 erpA erpA ABX22683.1 ABX22683.1 leuC leuC ABX22768.1 ABX22768.1 ispH ispH ABX22801.1 ABX22801.1 ABX24249.1 ABX24249.1 ABX24282.1 ABX24282.1 ABX24314.1 ABX24314.1 ABX24456.1 ABX24456.1 ABX21332.1 ABX21332.1 ABX21297.1 ABX21297.1 ABX21234.1 ABX21234.1 ttcA ttcA ABX21152.1 ABX21152.1 ABX21095.1 ABX21095.1 ABX21070.1 ABX21070.1 ABX21370.1 ABX21370.1 ABX22975.1 ABX22975.1 rsxB rsxB rsxC rsxC nth nth ABX21444.1 ABX21444.1 ABX21493.1 ABX21493.1 ABX21880.1 ABX21880.1 hcp hcp ABX21905.1 ABX21905.1 rlmC rlmC
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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co-expression
protein homology
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ABX21057.1Hypothetical protein; KEGG: stm:STM1786 1.1e-205 hydrogenase small chain K06282; COG: COG1740 Ni,Fe-hydrogenase I small subunit; Psort location: Periplasmic, score:9.44. (372 aa)
ABX21019.1Hypothetical protein; KEGG: stt:t1051 3.0e-242 sdaA; L-serine deaminase 1 K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (473 aa)
eddHypothetical protein; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa)
ABX20753.1Hypothetical protein; KEGG: eci:UTI89_C1819 1.1e-39 rnfC; electron transport complex protein RnfC K03615; COG: COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; Psort location: Cytoplasmic, score:8.96. (451 aa)
ABX20741.1Hypothetical protein; KEGG: stm:STM2065 0. phsA; Hydrogen sulfide production: membrane anchoring protein K08352; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Psort location: Periplasmic, score:9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (709 aa)
ABX20667.1Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (369 aa)
ABX20618.1Hypothetical protein; KEGG: sec:SC2212 1.3e-227 sdhL; putative D-serine dehydratase K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (433 aa)
napAHypothetical protein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa)
napFHypothetical protein; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. (171 aa)
nuoIHypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (190 aa)
ABX20502.1Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (910 aa)
ABX20501.1Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (445 aa)
ABX20500.1Hypothetical protein; KEGG: sty:STY2555 5.1e-89 nuoE; NADH dehydrogenase I chain E K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score:9.26. (166 aa)
nuoBHypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (220 aa)
queGHypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (384 aa)
ABX23124.1Hypothetical protein; KEGG: stm:STM4342 4.7e-134 frdB; fumarate reductase, anaerobic, Fe-S protein subunit K00245; COG: COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Psort location: Cytoplasmic, score:8.96. (244 aa)
ABX23132.1Hypothetical protein; KEGG: eci:UTI89_C4744 3.0e-162 yjeK; hypothetical protein YjeK K01843; COG: COG1509 Lysine 2,3-aminomutase; Psort location: Cytoplasmic, score:8.96. (342 aa)
ABX23174.1Hypothetical protein; KEGG: stm:STM4305.S 0. putative anaerobic dimethylsulfoxide reductase subunit A K00397; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Psort location: Periplasmic, score:9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (810 aa)
ABX23179.1Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (548 aa)
ABX23209.1Hypothetical protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (282 aa)
thiCHypothetical protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. (631 aa)
ABX23324.1Hypothetical protein; KEGG: mac:MA0154 1.0e-11 bioB; biotin synthase K01012; COG: COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes. (377 aa)
ABX23442.1Hypothetical protein; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (300 aa)
ABX23467.1Hypothetical protein; KEGG: stm:STM4004 1.2e-238 hemN; O2-independent coproporphyrinogen III oxidase K02495; COG: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Psort location: Cytoplasmic, score:9.97; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (457 aa)
ABX23496.1Hypothetical protein; KEGG: syg:sync_2368 2.8e-17 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (459 aa)
ilvDHypothetical protein; KEGG: spt:SPA3743 0. ilvD; dihydroxyacid dehydratase K01687; COG: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Psort location: Cytoplasmic, score:8.96; Belongs to the IlvD/Edd family. (603 aa)
nfuAHypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. (191 aa)
feoCHypothetical protein; May function as a transcriptional regulator that controls feoABC expression. (81 aa)
ABX23929.1Hypothetical protein; KEGG: stm:STM3474 0. nirB; nitrite reductase, large subunit K00362; COG: COG1251 NAD(P)H-nitrite reductase; Psort location: Cytoplasmic, score:9.97; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (847 aa)
ABX24157.1Hypothetical protein; KEGG: spt:SPA3109 1.4e-230 tdcG; L-serine dehydratase K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
ygiQKEGG: eci:UTI89_C3435 0. hypothetical protein; COG: COG1032 Fe-S oxidoreductase. (723 aa)
ABX20349.1Hypothetical protein; KEGG: syg:sync_2368 3.1e-25 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score:8.96. (413 aa)
ispGHypothetical protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (372 aa)
rlmNHypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (388 aa)
ABX20285.1Hypothetical protein; KEGG: dsy:DSY0357 3.7e-237 dmsA; putative anaerobic DMSO reductase chain A precursor K00369; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Psort location: Periplasmic, score:9.76; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (792 aa)
iscSHypothetical protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur and selenium atoms from cysteine and selenocysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. Also functions as a selenium delivery protein in the pathway for the biosynthesis of selenophosphate; Belongs to the class-V pyridoxal-phosphate-dependent aminotransfer [...] (404 aa)
iscRHypothetical protein; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins. (164 aa)
ABX20267.1Hypothetical protein; KEGG: cno:NT01CX_0256 1.7e-58 anaerobic sulfite reductase subunit B; COG: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Psort location: Cytoplasmic, score:9.97. (237 aa)
ABX20266.1Hypothetical protein; KEGG: stt:t0306 4.8e-180 asrC; anaerobic sulfite reductase subunit C K00385; COG: COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Psort location: Cytoplasmic, score:9.97; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (344 aa)
cysIHypothetical protein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (570 aa)
queEHypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (223 aa)
rlmDHypothetical protein; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (431 aa)
rimOHypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (441 aa)
dinGHypothetical protein; DNA-dependent ATPase and 5'-3' DNA helicase. (714 aa)
moaAHypothetical protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (340 aa)
ABX21406.1Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (548 aa)
bioBHypothetical protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (346 aa)
nadAHypothetical protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily. (348 aa)
ABX22077.1Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (550 aa)
ABX22085.1Hypothetical protein; KEGG: spt:SPA2008 8.1e-130 sdhB; succinate dehydrogenase iron-sulfur protein K00240; COG: COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (239 aa)
miaBHypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (488 aa)
lipAHypothetical protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (321 aa)
ABX22428.1Hypothetical protein; Accepts electrons from ETF and reduces ubiquinone. (561 aa)
erpAHypothetical protein; Required for insertion of 4Fe-4S clusters for at least IspG. (114 aa)
ABX22683.1Hypothetical protein; KEGG: sty:STY0181 0. acnB; aconitate hydratase 2 (citrate hydro-lyase 2) K01682; COG: COG1049 Aconitase B; Psort location: Cytoplasmic, score:8.96; Belongs to the aconitase/IPM isomerase family. (874 aa)
leuCHypothetical protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (466 aa)
ABX22768.1Hypothetical protein; Could be a 3Fe-4S cluster-containing protein. (95 aa)
ispHHypothetical protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. (316 aa)
ABX22801.1Hypothetical protein; KEGG: syg:sync_2368 6.6e-16 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score:8.96. (408 aa)
ABX24249.1Hypothetical protein; KEGG: sty:STY3321 2.8e-207 hyb0; hydrogenase small chain K06282; COG: COG1740 Ni,Fe-hydrogenase I small subunit; Psort location: Periplasmic, score:9.76. (372 aa)
ABX24282.1Hypothetical protein; KEGG: syg:sync_2368 9.3e-22 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (394 aa)
ABX24314.1Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (378 aa)
ABX24456.1Hypothetical protein; KEGG: stm:STM2971 9.4e-239 sdaB; L-serine dehydratase (L-threonine deaminase 2) K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa)
ABX21332.1Hypothetical protein; KEGG: stm:STM1499 0. putative dimethyl sulphoxide reductase, chain A1 K07309; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Psort location: Periplasmic, score:9.76; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (812 aa)
ABX21297.1Hypothetical protein; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (294 aa)
ABX21234.1Hypothetical protein; KEGG: spt:SPA1236 0. nifJ; probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit. (1174 aa)
ttcAHypothetical protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. (311 aa)
ABX21152.1Hypothetical protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (891 aa)
ABX21095.1Hypothetical protein; KEGG: stm:STM1764 0. narG; nitrate reductase alpha chain K00370; COG: COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa)
ABX21070.1Hypothetical protein; KEGG: syg:sync_2368 1.1e-13 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (410 aa)
ABX21370.1Hypothetical protein; KEGG: stm:STM1539 7.5e-182 hydrogenase small chain K06282; COG: COG1740 Ni,Fe-hydrogenase I small subunit; Psort location: Periplasmic, score:9.44. (330 aa)
ABX22975.1Hypothetical protein; KEGG: syg:sync_2368 3.4e-13 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score:8.96. (383 aa)
rsxBHypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (192 aa)
rsxCHypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (673 aa)
nthHypothetical protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa)
ABX21444.1Hypothetical protein; KEGG: ama:AM1083 1.2e-07 grxC1; glutaredoxin 3 K03676; COG: COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. (115 aa)
ABX21493.1Hypothetical protein; KEGG: afu:AF0159 6.0e-95 molybdopterin oxidoreductase, molybdopterin binding subunit K00183; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1020 aa)
ABX21880.1Hypothetical protein; KEGG: stm:STM0964 0. dmsA; anaerobic dimethyl sulfoxide reductase, subunit A K07306; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Psort location: Periplasmic, score:9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (814 aa)
hcpHypothetical protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (527 aa)
ABX21905.1Hypothetical protein; KEGG: spt:SPA1863 8.0e-162 hcr; NADH oxidoreductase Hcr; COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Psort location: Cytoplasmic, score:8.96. (311 aa)
rlmCHypothetical protein; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily. (375 aa)
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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