STRINGSTRING
gmd gmd fcl fcl ABX20713.1 ABX20713.1 ABX20714.1 ABX20714.1 ABX20718.1 ABX20718.1 ABX20719.1 ABX20719.1 ABX20720.1 ABX20720.1 ABX20724.1 ABX20724.1 ABX21103.1 ABX21103.1 ABX21407.1 ABX21407.1 ABX22042.1 ABX22042.1 wecE wecE wecD wecD ABX23530.1 ABX23530.1 ABX23531.1 ABX23531.1 wecC wecC wecB wecB glmU glmU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gmdHypothetical protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (375 aa)
fclHypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (321 aa)
ABX20713.1Hypothetical protein; KEGG: sec:SC2106 2.9e-260 manC; mannose-1-phosphate in colanic acid gene cluster K00971; COG: COG0662 Mannose-6-phosphate isomerase; Psort location: Cytoplasmic, score:8.96. (480 aa)
ABX20714.1Hypothetical protein; KEGG: stm:STM2104 1.3e-227 cpsG; phosphomannomutase in colanic acid gene cluster K01840; COG: COG1109 Phosphomannomutase; Psort location: Cytoplasmic, score:8.96. (455 aa)
ABX20718.1Hypothetical protein; KEGG: vfi:VF0191 8.9e-140 UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 3,5-epimerase K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases. (343 aa)
ABX20719.1Hypothetical protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (291 aa)
ABX20720.1Hypothetical protein; KEGG: lic:LIC12139 1.1e-132 rffE; UDP-N-acetylglucosamine 2-epimerase K01791; COG: COG0381 UDP-N-acetylglucosamine 2-epimerase; Psort location: Cytoplasmic, score:8.96. (381 aa)
ABX20724.1Hypothetical protein; KEGG: sec:SC2090 1.6e-195 udg; UDP-glucose/GDP-mannose dehydrogenase K00012; COG: COG1004 Predicted UDP-glucose 6-dehydrogenase; Psort location: Cytoplasmic, score:8.96. (388 aa)
ABX21103.1Hypothetical protein; KEGG: sty:STY1298 4.7e-157 galU; glucose-1-phosphate uridylyltransferase K00963; COG: COG1210 UDP-glucose pyrophosphorylase; Psort location: Cytoplasmic, score:8.96. (302 aa)
ABX21407.1Hypothetical protein; KEGG: stm:STM1467 7.1e-202 manA; mannose-6-phosphate isomerase K01809; COG: COG1482 Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (391 aa)
ABX22042.1Hypothetical protein; KEGG: sec:SC0774 5.6e-99 galE; UDP-galactose 4-epimerase K01784; COG: COG1087 UDP-glucose 4-epimerase. (184 aa)
wecEHypothetical protein; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)
wecDHypothetical protein; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family. (207 aa)
ABX23530.1Hypothetical protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (293 aa)
ABX23531.1Hypothetical protein; KEGG: stm:STM3922 3.6e-191 rffG; dTDP-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (355 aa)
wecCHypothetical protein; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily. (420 aa)
wecBHypothetical protein; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues. (361 aa)
glmUHypothetical protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. (455 aa)
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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