19 items (Erythranthe guttata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A022PS76	Uncharacterized protein. (162 aa)
	A0A022PVU1	Uncharacterized protein. (396 aa)
	A0A022Q3M0	Uncharacterized protein. (276 aa)
	A0A022QMF2	Uncharacterized protein. (134 aa)
	A0A022QMY8	Uncharacterized protein. (78 aa)
	A0A022QSR5	Uncharacterized protein. (102 aa)
	A0A022QUA0	Uncharacterized protein. (181 aa)
	A0A022QUZ6	Uncharacterized protein. (432 aa)
	A0A022R072	Uncharacterized protein. (245 aa)
	A0A022R0A3	Ribosomal_L30 domain-containing protein. (98 aa)
	A0A022R1F7	Uncharacterized protein. (147 aa)
	A0A022R219	Uncharacterized protein. (69 aa)
	A0A022R8T4	Uncharacterized protein. (128 aa)
	A0A022R9X4	Uncharacterized protein. (133 aa)
	A0A022RB99	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (159 aa)
	A0A022RCT7	Uncharacterized protein. (92 aa)
	A0A022RLM8	Uncharacterized protein. (493 aa)
	A0A022RYI2	Uncharacterized protein. (410 aa)
	A0A022S288	Uncharacterized protein. (380 aa)

Your Current Organism:

Erythranthe guttata

NCBI taxonomy Id: 4155
Other names: E. guttata, Erythranthe guttata (Fisch. ex DC.) G.L.Nesom, Mimulus guttatus, Mimulus guttatus Fisch. ex DC., Mimulus guttatus subsp. guttatus, common monkey flower, spotted monkey flower, yellow monkey flower

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A022PS76	A0A022PVU1	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022Q3M0	Uncharacterized protein.	Uncharacterized protein.	0.793
A0A022PS76	A0A022QMF2	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022QMY8	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022QSR5	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022QUA0	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022QUZ6	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022R072	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022R0A3	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.785
A0A022PS76	A0A022R1F7	Uncharacterized protein.	Uncharacterized protein.	0.795
A0A022PS76	A0A022R219	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022R8T4	Uncharacterized protein.	Uncharacterized protein.	0.795
A0A022PS76	A0A022R9X4	Uncharacterized protein.	Uncharacterized protein.	0.789
A0A022PS76	A0A022RB99	Uncharacterized protein.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.785
A0A022PS76	A0A022RCT7	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022RLM8	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022RYI2	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PS76	A0A022S288	Uncharacterized protein.	Uncharacterized protein.	0.795
A0A022PVU1	A0A022PS76	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A022PVU1	A0A022Q3M0	Uncharacterized protein.	Uncharacterized protein.	0.792

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