STRINGSTRING
tadG tadG tadF tadF tadE tadE tadD tadD tadC tadC tadB tadB tadA tadA tadZ tadZ rcpB rcpB rcpA rcpA rcpC rcpC tadV tadV flp2 flp2 flp1 flp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tadGTight adherence protein G. (520 aa)
tadFTight adherence protein F. (198 aa)
tadETight adherence protein E. (161 aa)
tadDTight adherence protein D. (250 aa)
tadCTight adherence protein C. (281 aa)
tadBTight adherence protein B. (295 aa)
tadATight adherence protein A. (425 aa)
tadZFlp operon protein D. (375 aa)
rcpBRough colony protein B. (167 aa)
rcpARough colony protein A; Belongs to the bacterial secretin family. (462 aa)
rcpCFlp operon protein C. (272 aa)
tadVFlp operon protein B. (142 aa)
flp2Minor fimbrial protein. (63 aa)
flp1Fimbrial protein Flp precursor. (76 aa)
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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