Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APL_0532 | thiD | APL_0532 | APL_0539 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Phosphomethylpyrimidine kinase. | 0.404 |
| APL_0532 | thiF | APL_0532 | APL_0533 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | 0.988 |
| APL_0532 | thiG | APL_0532 | APL_0535 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.633 |
| APL_0532 | thiS | APL_0532 | APL_0534 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Thiamine biosynthesis protein ThiS. | 0.845 |
| APL_0537 | thiD | APL_0537 | APL_0539 | Putative transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Phosphomethylpyrimidine kinase. | 0.999 |
| APL_0537 | thiG | APL_0537 | APL_0535 | Putative transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.806 |
| APL_0537 | thiH | APL_0537 | APL_0536 | Putative transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Thiazole biosynthesis protein ThiH. | 0.603 |
| APL_0537 | thiS | APL_0537 | APL_0534 | Putative transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Thiamine biosynthesis protein ThiS. | 0.529 |
| thiD | APL_0532 | APL_0539 | APL_0532 | Phosphomethylpyrimidine kinase. | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | 0.404 |
| thiD | APL_0537 | APL_0539 | APL_0537 | Phosphomethylpyrimidine kinase. | Putative transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.999 |
| thiD | thiF | APL_0539 | APL_0533 | Phosphomethylpyrimidine kinase. | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | 0.404 |
| thiD | thiG | APL_0539 | APL_0535 | Phosphomethylpyrimidine kinase. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.805 |
| thiD | thiH | APL_0539 | APL_0536 | Phosphomethylpyrimidine kinase. | Thiazole biosynthesis protein ThiH. | 0.616 |
| thiD | thiS | APL_0539 | APL_0534 | Phosphomethylpyrimidine kinase. | Thiamine biosynthesis protein ThiS. | 0.715 |
| thiF | APL_0532 | APL_0533 | APL_0532 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | 0.988 |
| thiF | thiD | APL_0533 | APL_0539 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Phosphomethylpyrimidine kinase. | 0.404 |
| thiF | thiG | APL_0533 | APL_0535 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.581 |
| thiF | thiS | APL_0533 | APL_0534 | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | Thiamine biosynthesis protein ThiS. | 0.989 |
| thiG | APL_0532 | APL_0535 | APL_0532 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis. | 0.633 |
| thiG | APL_0537 | APL_0535 | APL_0537 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Putative transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.806 |
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