15 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PSQ2	AB hydrolase-1 domain-containing protein. (312 aa)
	A0A1V6PXK2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (455 aa)
	A0A1V6Q0W9	Uncharacterized protein. (157 aa)
	A0A1V6Q1B7	Uncharacterized protein. (177 aa)
	A0A1V6Q6Z6	RING-type domain-containing protein. (375 aa)
	A0A1V6Q7L2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	A0A1V6Q9C4	Pex14_N domain-containing protein. (487 aa)
	A0A1V6QB68	Uncharacterized protein. (275 aa)
	A0A1V6QF58	Uncharacterized protein. (174 aa)
	A0A1V6QFN5	Uncharacterized protein. (321 aa)
	A0A1V6QHU1	SH3 domain-containing protein. (450 aa)
	A0A1V6QI24	TPR_REGION domain-containing protein. (651 aa)
	A0A1V6QIE8	Uncharacterized protein. (312 aa)
	A0A1V6QKB4	Uncharacterized protein. (224 aa)
	A0A1V6QN83	RING-type domain-containing protein. (493 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PSQ2	A0A1V6PXK2	AB hydrolase-1 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.710
A0A1V6PSQ2	A0A1V6Q0W9	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.626
A0A1V6PSQ2	A0A1V6Q1B7	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.626
A0A1V6PSQ2	A0A1V6Q7L2	AB hydrolase-1 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.710
A0A1V6PSQ2	A0A1V6Q9C4	AB hydrolase-1 domain-containing protein.	Pex14_N domain-containing protein.	0.977
A0A1V6PSQ2	A0A1V6QB68	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.425
A0A1V6PSQ2	A0A1V6QF58	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.569
A0A1V6PSQ2	A0A1V6QFN5	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.980
A0A1V6PSQ2	A0A1V6QHU1	AB hydrolase-1 domain-containing protein.	SH3 domain-containing protein.	0.977
A0A1V6PSQ2	A0A1V6QI24	AB hydrolase-1 domain-containing protein.	TPR_REGION domain-containing protein.	0.981
A0A1V6PSQ2	A0A1V6QIE8	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.621
A0A1V6PSQ2	A0A1V6QN83	AB hydrolase-1 domain-containing protein.	RING-type domain-containing protein.	0.979
A0A1V6PXK2	A0A1V6PSQ2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	AB hydrolase-1 domain-containing protein.	0.710
A0A1V6PXK2	A0A1V6Q0W9	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.944
A0A1V6PXK2	A0A1V6Q1B7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.944
A0A1V6PXK2	A0A1V6Q6Z6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	RING-type domain-containing protein.	0.981
A0A1V6PXK2	A0A1V6Q7L2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.973
A0A1V6PXK2	A0A1V6Q9C4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Pex14_N domain-containing protein.	0.985
A0A1V6PXK2	A0A1V6QB68	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.942
A0A1V6PXK2	A0A1V6QF58	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.908