11 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PRW0	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (300 aa)
	A0A1V6PTL8	Uncharacterized protein. (550 aa)
	A0A1V6PUC5	Peroxisomal membrane protein PEX16. (384 aa)
	A0A1V6PUY9	AAA domain-containing protein; Belongs to the AAA ATPase family. (416 aa)
	A0A1V6Q074	Uncharacterized protein. (706 aa)
	A0A1V6Q2F5	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (174 aa)
	A0A1V6Q2I9	Uncharacterized protein. (235 aa)
	A0A1V6Q4V6	Uncharacterized protein. (825 aa)
	A0A1V6Q553	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (335 aa)
	A0A1V6QID8	Uncharacterized protein. (245 aa)
	A0A1V6QL33	Uncharacterized protein. (402 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PRW0	A0A1V6PTL8	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.716
A0A1V6PRW0	A0A1V6PUC5	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peroxisomal membrane protein PEX16.	0.773
A0A1V6PRW0	A0A1V6PUY9	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.709
A0A1V6PRW0	A0A1V6Q074	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.731
A0A1V6PRW0	A0A1V6Q2F5	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.503
A0A1V6PRW0	A0A1V6Q2I9	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.791
A0A1V6PRW0	A0A1V6Q4V6	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.768
A0A1V6PRW0	A0A1V6Q553	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.725
A0A1V6PRW0	A0A1V6QID8	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.726
A0A1V6PRW0	A0A1V6QL33	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.883
A0A1V6PTL8	A0A1V6PRW0	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.716
A0A1V6PTL8	A0A1V6PUC5	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.880
A0A1V6PTL8	A0A1V6PUY9	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.745
A0A1V6PTL8	A0A1V6Q074	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A1V6PTL8	A0A1V6Q2F5	Uncharacterized protein.	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.724
A0A1V6PTL8	A0A1V6Q2I9	Uncharacterized protein.	Uncharacterized protein.	0.883
A0A1V6PTL8	A0A1V6Q4V6	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A1V6PTL8	A0A1V6Q553	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.685
A0A1V6PTL8	A0A1V6QID8	Uncharacterized protein.	Uncharacterized protein.	0.672
A0A1V6PTL8	A0A1V6QL33	Uncharacterized protein.	Uncharacterized protein.	0.999