6 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PTL8	Uncharacterized protein. (550 aa)
	A0A1V6PUC5	Peroxisomal membrane protein PEX16. (384 aa)
	A0A1V6Q074	Uncharacterized protein. (706 aa)
	A0A1V6Q2I9	Uncharacterized protein. (235 aa)
	A0A1V6Q4V6	Uncharacterized protein. (825 aa)
	A0A1V6QL33	Uncharacterized protein. (402 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PTL8	A0A1V6PUC5	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.880
A0A1V6PTL8	A0A1V6Q074	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A1V6PTL8	A0A1V6Q2I9	Uncharacterized protein.	Uncharacterized protein.	0.883
A0A1V6PTL8	A0A1V6Q4V6	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A1V6PTL8	A0A1V6QL33	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PUC5	A0A1V6PTL8	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.880
A0A1V6PUC5	A0A1V6Q074	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.736
A0A1V6PUC5	A0A1V6Q2I9	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.831
A0A1V6PUC5	A0A1V6Q4V6	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.736
A0A1V6PUC5	A0A1V6QL33	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.956
A0A1V6Q074	A0A1V6PTL8	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A1V6Q074	A0A1V6PUC5	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.736
A0A1V6Q074	A0A1V6Q2I9	Uncharacterized protein.	Uncharacterized protein.	0.751
A0A1V6Q074	A0A1V6Q4V6	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A1V6Q074	A0A1V6QL33	Uncharacterized protein.	Uncharacterized protein.	0.876
A0A1V6Q2I9	A0A1V6PTL8	Uncharacterized protein.	Uncharacterized protein.	0.883
A0A1V6Q2I9	A0A1V6PUC5	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.831
A0A1V6Q2I9	A0A1V6Q074	Uncharacterized protein.	Uncharacterized protein.	0.751
A0A1V6Q2I9	A0A1V6Q4V6	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A1V6Q2I9	A0A1V6QL33	Uncharacterized protein.	Uncharacterized protein.	0.983