19 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6NLS8	Uncharacterized protein. (251 aa)
	A0A1V6NS69	Uncharacterized protein. (70 aa)
	A0A1V6P6N5	Uncharacterized protein. (300 aa)
	A0A1V6PGU4	Uncharacterized protein. (229 aa)
	A0A1V6PM10	Uncharacterized protein. (343 aa)
	A0A1V6PM54	Uncharacterized protein. (142 aa)
	A0A1V6PWQ9	Ribonuclease P protein subunit. (242 aa)
	A0A1V6Q3C1	Uncharacterized protein. (198 aa)
	A0A1V6Q3H8	Uncharacterized protein. (883 aa)
	A0A1V6Q7V8	Uncharacterized protein. (218 aa)
	A0A1V6Q9W1	Uncharacterized protein. (213 aa)
	A0A1V6QAR6	Uncharacterized protein. (171 aa)
	A0A1V6QDL6	Kri1_C domain-containing protein. (601 aa)
	A0A1V6QDR4	Uncharacterized protein. (630 aa)
	A0A1V6QF70	Uncharacterized protein. (363 aa)
	A0A1V6QHZ2	Uncharacterized protein. (267 aa)
	A0A1V6QIQ1	Uncharacterized protein. (307 aa)
	A0A1V6QNQ9	Uncharacterized protein. (96 aa)
	A0A1V6QNU3	Uncharacterized protein. (212 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6NLS8	A0A1V6NS69	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1V6NLS8	A0A1V6PM54	Uncharacterized protein.	Uncharacterized protein.	0.727
A0A1V6NLS8	A0A1V6PWQ9	Uncharacterized protein.	Ribonuclease P protein subunit.	0.512
A0A1V6NLS8	A0A1V6Q3C1	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A1V6NLS8	A0A1V6Q3H8	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6NLS8	A0A1V6QAR6	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6NLS8	A0A1V6QDL6	Uncharacterized protein.	Kri1_C domain-containing protein.	0.503
A0A1V6NLS8	A0A1V6QIQ1	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6NLS8	A0A1V6QNQ9	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A1V6NLS8	A0A1V6QNU3	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A1V6NS69	A0A1V6NLS8	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1V6NS69	A0A1V6P6N5	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A1V6NS69	A0A1V6PWQ9	Uncharacterized protein.	Ribonuclease P protein subunit.	0.512
A0A1V6NS69	A0A1V6Q3C1	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A1V6NS69	A0A1V6Q3H8	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6NS69	A0A1V6QAR6	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6NS69	A0A1V6QDL6	Uncharacterized protein.	Kri1_C domain-containing protein.	0.503
A0A1V6NS69	A0A1V6QIQ1	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6NS69	A0A1V6QNQ9	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A1V6NS69	A0A1V6QNU3	Uncharacterized protein.	Uncharacterized protein.	0.511