11 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PT66	Uncharacterized protein. (936 aa)
	A0A1V6PUJ2	Uncharacterized protein. (866 aa)
	A0A1V6PWI7	Uncharacterized protein. (745 aa)
	A0A1V6Q0Y8	Uncharacterized protein. (1338 aa)
	A0A1V6Q1W2	Uncharacterized protein. (609 aa)
	A0A1V6Q7X0	Uncharacterized protein. (807 aa)
	A0A1V6QA82	Uncharacterized protein. (349 aa)
	A0A1V6QDB4	Uncharacterized protein. (853 aa)
	A0A1V6QG04	Uncharacterized protein. (492 aa)
	A0A1V6QGT9	Uncharacterized protein. (1145 aa)
	A0A1V6QJJ5	Uncharacterized protein. (773 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PT66	A0A1V6PWI7	Uncharacterized protein.	Uncharacterized protein.	0.509
A0A1V6PT66	A0A1V6Q0Y8	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A1V6PT66	A0A1V6Q1W2	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1V6PT66	A0A1V6QA82	Uncharacterized protein.	Uncharacterized protein.	0.494
A0A1V6PT66	A0A1V6QDB4	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A1V6PT66	A0A1V6QG04	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A1V6PT66	A0A1V6QGT9	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A1V6PT66	A0A1V6QJJ5	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A1V6PUJ2	A0A1V6PWI7	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A1V6PUJ2	A0A1V6Q7X0	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A1V6PUJ2	A0A1V6QG04	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A1V6PWI7	A0A1V6PT66	Uncharacterized protein.	Uncharacterized protein.	0.509
A0A1V6PWI7	A0A1V6PUJ2	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A1V6PWI7	A0A1V6QA82	Uncharacterized protein.	Uncharacterized protein.	0.453
A0A1V6PWI7	A0A1V6QG04	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A1V6PWI7	A0A1V6QGT9	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1V6PWI7	A0A1V6QJJ5	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A1V6Q0Y8	A0A1V6PT66	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A1V6Q0Y8	A0A1V6Q1W2	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A1V6Q0Y8	A0A1V6QA82	Uncharacterized protein.	Uncharacterized protein.	0.402