12 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PSG9	Uncharacterized protein. (2172 aa)
	A0A1V6PTP0	CCHC-type domain-containing protein. (1209 aa)
	A0A1V6PUB0	Uncharacterized protein. (723 aa)
	A0A1V6PXF2	CID domain-containing protein. (418 aa)
	A0A1V6Q522	Uncharacterized protein. (643 aa)
	A0A1V6Q762	Uncharacterized protein. (735 aa)
	A0A1V6Q9C0	RRM domain-containing protein. (829 aa)
	A0A1V6QAG6	RAI1 domain-containing protein. (373 aa)
	A0A1V6QAT6	Uncharacterized protein. (703 aa)
	A0A1V6QIG6	Uncharacterized protein. (530 aa)
	A0A1V6QML1	Uncharacterized protein. (503 aa)
	A0A1V6QN27	Uncharacterized protein. (578 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PSG9	A0A1V6PTP0	Uncharacterized protein.	CCHC-type domain-containing protein.	0.634
A0A1V6PSG9	A0A1V6PUB0	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A1V6PSG9	A0A1V6PXF2	Uncharacterized protein.	CID domain-containing protein.	0.433
A0A1V6PSG9	A0A1V6Q9C0	Uncharacterized protein.	RRM domain-containing protein.	0.844
A0A1V6PSG9	A0A1V6QN27	Uncharacterized protein.	Uncharacterized protein.	0.457
A0A1V6PTP0	A0A1V6PSG9	CCHC-type domain-containing protein.	Uncharacterized protein.	0.634
A0A1V6PTP0	A0A1V6PUB0	CCHC-type domain-containing protein.	Uncharacterized protein.	0.650
A0A1V6PTP0	A0A1V6PXF2	CCHC-type domain-containing protein.	CID domain-containing protein.	0.962
A0A1V6PTP0	A0A1V6Q762	CCHC-type domain-containing protein.	Uncharacterized protein.	0.499
A0A1V6PTP0	A0A1V6Q9C0	CCHC-type domain-containing protein.	RRM domain-containing protein.	0.574
A0A1V6PTP0	A0A1V6QAG6	CCHC-type domain-containing protein.	RAI1 domain-containing protein.	0.988
A0A1V6PTP0	A0A1V6QAT6	CCHC-type domain-containing protein.	Uncharacterized protein.	0.553
A0A1V6PUB0	A0A1V6PSG9	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A1V6PUB0	A0A1V6PTP0	Uncharacterized protein.	CCHC-type domain-containing protein.	0.650
A0A1V6PUB0	A0A1V6PXF2	Uncharacterized protein.	CID domain-containing protein.	0.643
A0A1V6PUB0	A0A1V6Q762	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A1V6PUB0	A0A1V6Q9C0	Uncharacterized protein.	RRM domain-containing protein.	0.961
A0A1V6PUB0	A0A1V6QAT6	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A1V6PUB0	A0A1V6QIG6	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1V6PUB0	A0A1V6QN27	Uncharacterized protein.	Uncharacterized protein.	0.663