17 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PTY5	F-box domain-containing protein. (563 aa)
	A0A1V6PV04	Uncharacterized protein; Belongs to the DEAD box helicase family. (396 aa)
	A0A1V6Q1G4	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (237 aa)
	A0A1V6Q257	Uncharacterized protein. (362 aa)
	A0A1V6Q2A3	Uncharacterized protein; Belongs to the DEAD box helicase family. (587 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1168 aa)
	A0A1V6Q4J4	Uncharacterized protein. (442 aa)
	A0A1V6Q5Y5	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (738 aa)
	A0A1V6Q6P4	HTH La-type RNA-binding domain-containing protein. (975 aa)
	A0A1V6Q813	MIF4G domain-containing protein. (1460 aa)
	A0A1V6QAX0	PUM-HD domain-containing protein. (897 aa)
	A0A1V6QGA7	Uncharacterized protein. (858 aa)
	A0A1V6QGG2	Uncharacterized protein. (509 aa)
	A0A1V6QMZ5	RRM domain-containing protein. (493 aa)
	A0A1V6QNE0	Uncharacterized protein. (1268 aa)
	A0A1V6QNI2	Uncharacterized protein. (547 aa)
	A0A1V6QQE4	Uncharacterized protein. (634 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6PTY5	A0A1V6PV04	A0A1V6PTY5	A0A1V6PV04	F-box domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.945
A0A1V6PTY5	A0A1V6Q1G4	A0A1V6PTY5	A0A1V6Q1G4	F-box domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.923
A0A1V6PTY5	A0A1V6Q257	A0A1V6PTY5	A0A1V6Q257	F-box domain-containing protein.	Uncharacterized protein.	0.823
A0A1V6PTY5	A0A1V6Q2A3	A0A1V6PTY5	A0A1V6Q2A3	F-box domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.665
A0A1V6PTY5	A0A1V6Q4J4	A0A1V6PTY5	A0A1V6Q4J4	F-box domain-containing protein.	Uncharacterized protein.	0.923
A0A1V6PTY5	A0A1V6Q6P4	A0A1V6PTY5	A0A1V6Q6P4	F-box domain-containing protein.	HTH La-type RNA-binding domain-containing protein.	0.648
A0A1V6PTY5	A0A1V6Q813	A0A1V6PTY5	A0A1V6Q813	F-box domain-containing protein.	MIF4G domain-containing protein.	0.882
A0A1V6PTY5	A0A1V6QAX0	A0A1V6PTY5	A0A1V6QAX0	F-box domain-containing protein.	PUM-HD domain-containing protein.	0.447
A0A1V6PTY5	A0A1V6QGA7	A0A1V6PTY5	A0A1V6QGA7	F-box domain-containing protein.	Uncharacterized protein.	0.716
A0A1V6PTY5	A0A1V6QGG2	A0A1V6PTY5	A0A1V6QGG2	F-box domain-containing protein.	Uncharacterized protein.	0.882
A0A1V6PTY5	A0A1V6QMZ5	A0A1V6PTY5	A0A1V6QMZ5	F-box domain-containing protein.	RRM domain-containing protein.	0.526
A0A1V6PTY5	A0A1V6QNE0	A0A1V6PTY5	A0A1V6QNE0	F-box domain-containing protein.	Uncharacterized protein.	0.882
A0A1V6PTY5	A0A1V6QNI2	A0A1V6PTY5	A0A1V6QNI2	F-box domain-containing protein.	Uncharacterized protein.	0.665
A0A1V6PTY5	A0A1V6QQE4	A0A1V6PTY5	A0A1V6QQE4	F-box domain-containing protein.	Uncharacterized protein.	0.665
A0A1V6PTY5	PAN2	A0A1V6PTY5	A0A1V6Q2M5	F-box domain-containing protein.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	0.925
A0A1V6PV04	A0A1V6PTY5	A0A1V6PV04	A0A1V6PTY5	Uncharacterized protein; Belongs to the DEAD box helicase family.	F-box domain-containing protein.	0.945
A0A1V6PV04	A0A1V6Q1G4	A0A1V6PV04	A0A1V6Q1G4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.980
A0A1V6PV04	A0A1V6Q257	A0A1V6PV04	A0A1V6Q257	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.605
A0A1V6PV04	A0A1V6Q2A3	A0A1V6PV04	A0A1V6Q2A3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.729
A0A1V6PV04	A0A1V6Q4J4	A0A1V6PV04	A0A1V6Q4J4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.937