13 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PQP3	Sm domain-containing protein. (578 aa)
	A0A1V6PU14	Uncharacterized protein. (324 aa)
	A0A1V6Q1M1	Uncharacterized protein. (288 aa)
	A0A1V6Q1R6	Sm domain-containing protein. (92 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	A0A1V6QBL7	Nudix hydrolase domain-containing protein. (857 aa)
	A0A1V6QBN4	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. (685 aa)
	A0A1V6QBY7	PAT1 domain-containing protein. (811 aa)
	A0A1V6QG94	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1395 aa)
	A0A1V6QHE2	Uncharacterized protein. (389 aa)
	A0A1V6QHR4	Uncharacterized protein; Belongs to the DEAD box helicase family. (512 aa)
	A0A1V6QKP9	Uncharacterized protein. (532 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6PQP3	A0A1V6PU14	A0A1V6PQP3	A0A1V6PU14	Sm domain-containing protein.	Uncharacterized protein.	0.869
A0A1V6PQP3	A0A1V6Q1M1	A0A1V6PQP3	A0A1V6Q1M1	Sm domain-containing protein.	Uncharacterized protein.	0.918
A0A1V6PQP3	A0A1V6Q1R6	A0A1V6PQP3	A0A1V6Q1R6	Sm domain-containing protein.	Sm domain-containing protein.	0.999
A0A1V6PQP3	A0A1V6QBL7	A0A1V6PQP3	A0A1V6QBL7	Sm domain-containing protein.	Nudix hydrolase domain-containing protein.	0.918
A0A1V6PQP3	A0A1V6QBN4	A0A1V6PQP3	A0A1V6QBN4	Sm domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.877
A0A1V6PQP3	A0A1V6QBY7	A0A1V6PQP3	A0A1V6QBY7	Sm domain-containing protein.	PAT1 domain-containing protein.	0.999
A0A1V6PQP3	A0A1V6QG94	A0A1V6PQP3	A0A1V6QG94	Sm domain-containing protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.972
A0A1V6PQP3	A0A1V6QHE2	A0A1V6PQP3	A0A1V6QHE2	Sm domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PQP3	A0A1V6QHR4	A0A1V6PQP3	A0A1V6QHR4	Sm domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.995
A0A1V6PQP3	A0A1V6QKP9	A0A1V6PQP3	A0A1V6QKP9	Sm domain-containing protein.	Uncharacterized protein.	0.659
A0A1V6PQP3	LSM3	A0A1V6PQP3	A0A1V6QBE4	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A1V6PQP3	LSM5	A0A1V6PQP3	A0A1V6Q7Z4	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A1V6PU14	A0A1V6PQP3	A0A1V6PU14	A0A1V6PQP3	Uncharacterized protein.	Sm domain-containing protein.	0.869
A0A1V6PU14	A0A1V6Q1M1	A0A1V6PU14	A0A1V6Q1M1	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6PU14	A0A1V6Q1R6	A0A1V6PU14	A0A1V6Q1R6	Uncharacterized protein.	Sm domain-containing protein.	0.765
A0A1V6PU14	A0A1V6QBL7	A0A1V6PU14	A0A1V6QBL7	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.978
A0A1V6PU14	A0A1V6QBN4	A0A1V6PU14	A0A1V6QBN4	Uncharacterized protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.983
A0A1V6PU14	A0A1V6QBY7	A0A1V6PU14	A0A1V6QBY7	Uncharacterized protein.	PAT1 domain-containing protein.	0.981
A0A1V6PU14	A0A1V6QG94	A0A1V6PU14	A0A1V6QG94	Uncharacterized protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.998
A0A1V6PU14	A0A1V6QHE2	A0A1V6PU14	A0A1V6QHE2	Uncharacterized protein.	Uncharacterized protein.	0.876