8 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PYH9	Uncharacterized protein. (437 aa)
	A0A1V6PX25	Uncharacterized protein. (162 aa)
	A0A1V6Q6R5	Uncharacterized protein. (121 aa)
	A0A1V6QA78	Uncharacterized protein. (173 aa)
	A0A1V6PR59	Uncharacterized protein. (1079 aa)
	A0A1V6Q6G4	Uncharacterized protein. (138 aa)
	A0A1V6PZT6	Uncharacterized protein. (210 aa)
	A0A1V6PYE8	Spindle pole body component. (952 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PX25	A0A1V6PYE8	Uncharacterized protein.	Spindle pole body component.	0.852
A0A1V6PX25	A0A1V6PYH9	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A1V6PX25	A0A1V6PZT6	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A1V6PX25	A0A1V6Q6G4	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A1V6PX25	A0A1V6QA78	Uncharacterized protein.	Uncharacterized protein.	0.963
A0A1V6PYE8	A0A1V6PX25	Spindle pole body component.	Uncharacterized protein.	0.852
A0A1V6PYE8	A0A1V6PZT6	Spindle pole body component.	Uncharacterized protein.	0.854
A0A1V6PYE8	A0A1V6Q6G4	Spindle pole body component.	Uncharacterized protein.	0.961
A0A1V6PYE8	A0A1V6QA78	Spindle pole body component.	Uncharacterized protein.	0.850
A0A1V6PYH9	A0A1V6PX25	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A1V6PYH9	A0A1V6PZT6	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A1V6PYH9	A0A1V6Q6G4	Uncharacterized protein.	Uncharacterized protein.	0.947
A0A1V6PYH9	A0A1V6QA78	Uncharacterized protein.	Uncharacterized protein.	0.877
A0A1V6PZT6	A0A1V6PX25	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A1V6PZT6	A0A1V6PYE8	Uncharacterized protein.	Spindle pole body component.	0.854
A0A1V6PZT6	A0A1V6PYH9	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A1V6PZT6	A0A1V6Q6G4	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A1V6PZT6	A0A1V6QA78	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A1V6Q6G4	A0A1V6PX25	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A1V6Q6G4	A0A1V6PYE8	Uncharacterized protein.	Spindle pole body component.	0.961