48 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QK23	RRM domain-containing protein. (382 aa)
	A0A1V6QK77	RRM domain-containing protein. (385 aa)
	A0A1V6PQ54	Uncharacterized protein. (755 aa)
	A0A1V6PQD5	Uncharacterized protein. (1176 aa)
	A0A1V6PRK0	Uncharacterized protein. (670 aa)
	A0A1V6PRK5	Uncharacterized protein. (794 aa)
	A0A1V6PRX7	Tr-type G domain-containing protein. (984 aa)
	A0A1V6PS00	PSP domain-containing protein. (556 aa)
	A0A1V6PS50	Matrin-type domain-containing protein. (501 aa)
	A0A1V6PTB4	Uncharacterized protein. (336 aa)
	A0A1V6PU82	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (569 aa)
	A0A1V6PUR9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
	A0A1V6PV40	Uncharacterized protein. (562 aa)
	A0A1V6PVP0	Uncharacterized protein. (288 aa)
	A0A1V6PW59	Uncharacterized protein. (587 aa)
	A0A1V6QLX6	Uncharacterized protein. (338 aa)
	A0A1V6PW98	Uncharacterized protein. (697 aa)
	A0A1V6PWH6	Uncharacterized protein. (564 aa)
	A0A1V6PWL3	Uncharacterized protein. (758 aa)
	A0A1V6PWS0	Uncharacterized protein. (825 aa)
	A0A1V6PXX5	Cir_N domain-containing protein. (434 aa)
	A0A1V6QKY6	Uncharacterized protein. (574 aa)
	A0A1V6PZH3	Uncharacterized protein. (459 aa)
	A0A1V6Q073	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1395 aa)
	A0A1V6Q085	Sm domain-containing protein. (211 aa)
	A0A1V6Q130	SF3b1 domain-containing protein. (1224 aa)
	A0A1V6Q156	Uncharacterized protein. (374 aa)
	A0A1V6QNZ5	Nuclear cap-binding protein subunit 2. (175 aa)
	A0A1V6Q3M2	Uncharacterized protein. (286 aa)
	A0A1V6Q452	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
	A0A1V6Q4L0	RRM domain-containing protein. (185 aa)
	A0A1V6Q603	Uncharacterized protein. (933 aa)
	A0A1V6Q6X4	Uncharacterized protein. (197 aa)
	A0A1V6Q7Y0	GH16 domain-containing protein. (386 aa)
	A0A1V6QA98	Uncharacterized protein. (348 aa)
	A0A1V6QBK1	MFAP1 domain-containing protein. (490 aa)
	A0A1V6QBU3	Small nuclear ribonucleoprotein Sm D2. (117 aa)
	A0A1V6QC04	Uncharacterized protein. (476 aa)
	A0A1V6QC19	RRM domain-containing protein. (405 aa)
	A0A1V6QC58	Uncharacterized protein. (1636 aa)
	A0A1V6QE91	RRM domain-containing protein. (113 aa)
	A0A1V6QEH3	Uncharacterized protein. (702 aa)
	A0A1V6QEP5	G-patch domain-containing protein. (769 aa)
	A0A1V6QEW1	U1-type domain-containing protein. (297 aa)
	A0A1V6QEX9	Matrin-type domain-containing protein. (235 aa)
	A0A1V6QH13	RRM domain-containing protein. (429 aa)
	A0A1V6QHJ4	Uncharacterized protein. (266 aa)
	A0A1V6QIF1	Small nuclear ribonucleoprotein G. (77 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PQ54	A0A1V6PQD5	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A1V6PQ54	A0A1V6PRK5	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A1V6PQ54	A0A1V6PS00	Uncharacterized protein.	PSP domain-containing protein.	0.748
A0A1V6PQ54	A0A1V6PS50	Uncharacterized protein.	Matrin-type domain-containing protein.	0.713
A0A1V6PQ54	A0A1V6PU82	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.962
A0A1V6PQ54	A0A1V6PUR9	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.768
A0A1V6PQ54	A0A1V6PV40	Uncharacterized protein.	Uncharacterized protein.	0.793
A0A1V6PQ54	A0A1V6PVP0	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1V6PQ54	A0A1V6PW59	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A1V6PQ54	A0A1V6PWH6	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A1V6PQ54	A0A1V6PWL3	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PQ54	A0A1V6Q085	Uncharacterized protein.	Sm domain-containing protein.	0.768
A0A1V6PQ54	A0A1V6Q130	Uncharacterized protein.	SF3b1 domain-containing protein.	0.936
A0A1V6PQ54	A0A1V6Q452	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.920
A0A1V6PQ54	A0A1V6Q4L0	Uncharacterized protein.	RRM domain-containing protein.	0.766
A0A1V6PQ54	A0A1V6Q7Y0	Uncharacterized protein.	GH16 domain-containing protein.	0.828
A0A1V6PQ54	A0A1V6QA98	Uncharacterized protein.	Uncharacterized protein.	0.758
A0A1V6PQ54	A0A1V6QBU3	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.927
A0A1V6PQ54	A0A1V6QC04	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A1V6PQ54	A0A1V6QC19	Uncharacterized protein.	RRM domain-containing protein.	0.988