17 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QAT6	Uncharacterized protein. (703 aa)
	A0A1V6PRV0	RNase III domain-containing protein. (379 aa)
	A0A1V6PSG9	Uncharacterized protein. (2172 aa)
	A0A1V6PTP0	CCHC-type domain-containing protein. (1209 aa)
	A0A1V6PUA8	Uncharacterized protein. (614 aa)
	A0A1V6PUB0	Uncharacterized protein. (723 aa)
	A0A1V6PVM5	eRF1_1 domain-containing protein. (529 aa)
	A0A1V6PXT5	Uncharacterized protein; Belongs to the DEAD box helicase family. (572 aa)
	A0A1V6PZ73	Uncharacterized protein. (854 aa)
	A0A1V6PZQ0	Plus3 domain-containing protein. (607 aa)
	A0A1V6Q6H2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
	A0A1V6Q9C0	RRM domain-containing protein. (829 aa)
	A0A1V6Q9E4	Uncharacterized protein. (653 aa)
	A0A1V6QAG6	RAI1 domain-containing protein. (373 aa)
	A0A1V6QD23	RNase_PH domain-containing protein. (268 aa)
	A0A1V6QEP8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1248 aa)
	A0A1V6QPB0	Uncharacterized protein. (1106 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PRV0	A0A1V6PSG9	RNase III domain-containing protein.	Uncharacterized protein.	0.669
A0A1V6PRV0	A0A1V6PTP0	RNase III domain-containing protein.	CCHC-type domain-containing protein.	0.547
A0A1V6PRV0	A0A1V6PUB0	RNase III domain-containing protein.	Uncharacterized protein.	0.431
A0A1V6PRV0	A0A1V6PXT5	RNase III domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.885
A0A1V6PRV0	A0A1V6Q9C0	RNase III domain-containing protein.	RRM domain-containing protein.	0.537
A0A1V6PRV0	A0A1V6QAT6	RNase III domain-containing protein.	Uncharacterized protein.	0.479
A0A1V6PSG9	A0A1V6PRV0	Uncharacterized protein.	RNase III domain-containing protein.	0.669
A0A1V6PSG9	A0A1V6PTP0	Uncharacterized protein.	CCHC-type domain-containing protein.	0.634
A0A1V6PSG9	A0A1V6PUA8	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A1V6PSG9	A0A1V6PUB0	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A1V6PSG9	A0A1V6PZ73	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A1V6PSG9	A0A1V6Q9C0	Uncharacterized protein.	RRM domain-containing protein.	0.844
A0A1V6PTP0	A0A1V6PRV0	CCHC-type domain-containing protein.	RNase III domain-containing protein.	0.547
A0A1V6PTP0	A0A1V6PSG9	CCHC-type domain-containing protein.	Uncharacterized protein.	0.634
A0A1V6PTP0	A0A1V6PUA8	CCHC-type domain-containing protein.	Uncharacterized protein.	0.542
A0A1V6PTP0	A0A1V6PUB0	CCHC-type domain-containing protein.	Uncharacterized protein.	0.650
A0A1V6PTP0	A0A1V6PXT5	CCHC-type domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.566
A0A1V6PTP0	A0A1V6PZ73	CCHC-type domain-containing protein.	Uncharacterized protein.	0.562
A0A1V6PTP0	A0A1V6Q9C0	CCHC-type domain-containing protein.	RRM domain-containing protein.	0.574
A0A1V6PTP0	A0A1V6QAG6	CCHC-type domain-containing protein.	RAI1 domain-containing protein.	0.988