27 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PXQ5	Uncharacterized protein. (1219 aa)
	A0A1V6PY80	Pex24p domain-containing protein. (527 aa)
	A0A1V6PYD2	Uncharacterized protein. (685 aa)
	A0A1V6Q1L8	J domain-containing protein. (477 aa)
	A0A1V6Q6J8	WD_REPEATS_REGION domain-containing protein. (354 aa)
	A0A1V6Q6Z6	RING-type domain-containing protein. (375 aa)
	A0A1V6Q1Z4	AAA domain-containing protein. (1468 aa)
	A0A1V6Q2I9	Uncharacterized protein. (235 aa)
	A0A1V6Q4V6	Uncharacterized protein. (825 aa)
	A0A1V6Q553	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (335 aa)
	A0A1V6Q7B9	Peroxin/Ferlin domain-containing protein. (580 aa)
	A0A1V6Q9C4	Pex14_N domain-containing protein. (487 aa)
	A0A1V6QCQ6	WD_REPEATS_REGION domain-containing protein. (650 aa)
	A0A1V6PTL4	Protein YOP1. (171 aa)
	A0A1V6PSA4	Uncharacterized protein. (122 aa)
	A0A1V6PS98	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (713 aa)
	A0A1V6PTL8	Uncharacterized protein. (550 aa)
	A0A1V6PUC5	Peroxisomal membrane protein PEX16. (384 aa)
	A0A1V6PUC7	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (796 aa)
	A0A1V6PW43	Pex2_Pex12 domain-containing protein. (481 aa)
	A0A1V6QDE0	MPN domain-containing protein. (335 aa)
	A0A1V6QHU1	SH3 domain-containing protein. (450 aa)
	A0A1V6QI24	TPR_REGION domain-containing protein. (651 aa)
	A0A1V6QL33	Uncharacterized protein. (402 aa)
	A0A1V6QN83	RING-type domain-containing protein. (493 aa)
	A0A1V6QNP2	Uncharacterized protein. (687 aa)
	A0A1V6PWJ6	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (928 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PS98	A0A1V6PUC7	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.444
A0A1V6PS98	A0A1V6Q1Z4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	AAA domain-containing protein.	0.439
A0A1V6PS98	A0A1V6Q2I9	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.510
A0A1V6PS98	A0A1V6QCQ6	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	WD_REPEATS_REGION domain-containing protein.	0.680
A0A1V6PS98	A0A1V6QDE0	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	MPN domain-containing protein.	0.522
A0A1V6PS98	A0A1V6QL33	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.472
A0A1V6PS98	A0A1V6QNP2	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.545
A0A1V6PSA4	A0A1V6PTL8	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1V6PSA4	A0A1V6PWJ6	Uncharacterized protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.430
A0A1V6PSA4	A0A1V6PXQ5	Uncharacterized protein.	Uncharacterized protein.	0.842
A0A1V6PSA4	A0A1V6Q1Z4	Uncharacterized protein.	AAA domain-containing protein.	0.805
A0A1V6PSA4	A0A1V6Q2I9	Uncharacterized protein.	Uncharacterized protein.	0.717
A0A1V6PSA4	A0A1V6Q6J8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.799
A0A1V6PSA4	A0A1V6Q6Z6	Uncharacterized protein.	RING-type domain-containing protein.	0.936
A0A1V6PSA4	A0A1V6Q9C4	Uncharacterized protein.	Pex14_N domain-containing protein.	0.845
A0A1V6PSA4	A0A1V6QDE0	Uncharacterized protein.	MPN domain-containing protein.	0.701
A0A1V6PSA4	A0A1V6QHU1	Uncharacterized protein.	SH3 domain-containing protein.	0.886
A0A1V6PSA4	A0A1V6QI24	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.834
A0A1V6PSA4	A0A1V6QL33	Uncharacterized protein.	Uncharacterized protein.	0.677
A0A1V6PSA4	A0A1V6QN83	Uncharacterized protein.	RING-type domain-containing protein.	0.944