28 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QN78	Uncharacterized protein; Belongs to the AAA ATPase family. (820 aa)
	A0A1V6PR59	Uncharacterized protein. (1079 aa)
	A0A1V6PS80	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (385 aa)
	A0A1V6PTI0	Spindle pole body component. (878 aa)
	A0A1V6PYN5	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (488 aa)
	A0A1V6PZ04	Uncharacterized protein. (486 aa)
	A0A1V6PZP8	Uncharacterized protein. (900 aa)
	A0A1V6Q199	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (796 aa)
	A0A1V6Q1A2	MPN domain-containing protein. (1255 aa)
	A0A1V6Q1N3	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1181 aa)
	A0A1V6Q4N2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
	A0A1V6Q528	Uncharacterized protein. (417 aa)
	A0A1V6Q5U7	Uncharacterized protein. (954 aa)
	A0A1V6Q5Y8	AIP3 domain-containing protein. (1004 aa)
	A0A1V6Q6F5	Uncharacterized protein. (1086 aa)
	A0A1V6Q9A7	Uncharacterized protein. (1209 aa)
	A0A1V6QA91	Spindle pole body component. (1012 aa)
	A0A1V6QCW5	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1002 aa)
	A0A1V6QDB0	TYR_PHOSPHATASE_2 domain-containing protein. (605 aa)
	A0A1V6QGP3	Spindle pole body component. (837 aa)
	A0A1V6QI65	Serine/threonine-protein kinase. (1142 aa)
	A0A1V6QIL7	Uncharacterized protein. (281 aa)
	A0A1V6QKP1	EB1 C-terminal domain-containing protein. (225 aa)
	A0A1V6QLQ0	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (807 aa)
	A0A1V6QNA4	Spindle pole body component. (791 aa)
	A0A1V6QNJ7	Uncharacterized protein. (386 aa)
	A0A1V6QPD0	Uncharacterized protein. (481 aa)
	A0A1V6QPL0	Uncharacterized protein. (778 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PR59	A0A1V6PZP8	Uncharacterized protein.	Uncharacterized protein.	0.787
A0A1V6PR59	A0A1V6Q1N3	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.445
A0A1V6PR59	A0A1V6Q9A7	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1V6PR59	A0A1V6QI65	Uncharacterized protein.	Serine/threonine-protein kinase.	0.432
A0A1V6PR59	A0A1V6QKP1	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.544
A0A1V6PR59	A0A1V6QPL0	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A1V6PS80	A0A1V6PYN5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.588
A0A1V6PS80	A0A1V6PZP8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.711
A0A1V6PS80	A0A1V6Q199	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.549
A0A1V6PS80	A0A1V6Q1N3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.952
A0A1V6PS80	A0A1V6Q4N2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.786
A0A1V6PS80	A0A1V6Q6F5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.752
A0A1V6PS80	A0A1V6Q9A7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.529
A0A1V6PS80	A0A1V6QA91	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Spindle pole body component.	0.472
A0A1V6PS80	A0A1V6QCW5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.683
A0A1V6PS80	A0A1V6QDB0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TYR_PHOSPHATASE_2 domain-containing protein.	0.752
A0A1V6PS80	A0A1V6QI65	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase.	0.980
A0A1V6PS80	A0A1V6QIL7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.549
A0A1V6PS80	A0A1V6QKP1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	EB1 C-terminal domain-containing protein.	0.924
A0A1V6PS80	A0A1V6QLQ0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.456