7 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QP08	Uncharacterized protein. (469 aa)
	A0A1V6QCU2	Uncharacterized protein. (535 aa)
	A0A1V6Q3W8	Uncharacterized protein. (494 aa)
	A0A1V6PV46	Uncharacterized protein. (500 aa)
	A0A1V6PSQ8	Protein kinase domain-containing protein. (467 aa)
	A0A1V6PQ01	Uncharacterized protein. (120 aa)
	A0A1V6PPD3	Protein kinase domain-containing protein. (1147 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PQ01	A0A1V6PSQ8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.754
A0A1V6PQ01	A0A1V6Q3W8	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A1V6PQ01	A0A1V6QCU2	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A1V6PQ01	A0A1V6QP08	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A1V6PSQ8	A0A1V6PQ01	Protein kinase domain-containing protein.	Uncharacterized protein.	0.754
A0A1V6PSQ8	A0A1V6PV46	Protein kinase domain-containing protein.	Uncharacterized protein.	0.502
A0A1V6PV46	A0A1V6PSQ8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.502
A0A1V6Q3W8	A0A1V6PQ01	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A1V6QCU2	A0A1V6PQ01	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A1V6QP08	A0A1V6PQ01	Uncharacterized protein.	Uncharacterized protein.	0.612