21 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PZE7	TRUD domain-containing protein. (740 aa)
	A0A1V6PS91	Uncharacterized protein. (247 aa)
	A0A1V6PSN0	RNase_PH domain-containing protein. (394 aa)
	A0A1V6PU54	Uncharacterized protein. (292 aa)
	A0A1V6PUW1	PUA domain-containing protein. (472 aa)
	A0A1V6PVQ4	ECR1_N domain-containing protein. (391 aa)
	A0A1V6PW05	Uncharacterized protein. (224 aa)
	A0A1V6PW10	RNase_PH domain-containing protein. (386 aa)
	A0A1V6PZT1	Ribosomal_L7Ae domain-containing protein. (223 aa)
	A0A1V6Q603	Uncharacterized protein. (933 aa)
	A0A1V6Q8X0	Uncharacterized protein. (272 aa)
	A0A1V6QAC8	HRDC domain-containing protein. (754 aa)
	A0A1V6QAJ3	Bin3-type SAM domain-containing protein. (140 aa)
	A0A1V6QD23	RNase_PH domain-containing protein. (268 aa)
	USB1	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (294 aa)
	A0A1V6QI72	Exonuclease domain-containing protein. (706 aa)
	A0A1V6QN11	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (208 aa)
	A0A1V6QN27	Uncharacterized protein. (578 aa)
	A0A1V6QPG5	Uncharacterized protein. (358 aa)
	A0A1V6PI87	Uncharacterized protein. (197 aa)
	A0A1V6PRV0	RNase III domain-containing protein. (379 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PS91	A0A1V6PSN0	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6PVQ4	Uncharacterized protein.	ECR1_N domain-containing protein.	0.999
A0A1V6PS91	A0A1V6PW05	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1V6PS91	A0A1V6PW10	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6PZT1	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.848
A0A1V6PS91	A0A1V6Q603	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A1V6PS91	A0A1V6Q8X0	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PS91	A0A1V6QD23	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6QI72	Uncharacterized protein.	Exonuclease domain-containing protein.	0.430
A0A1V6PS91	A0A1V6QN27	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A1V6PS91	A0A1V6QPG5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PSN0	A0A1V6PS91	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PSN0	A0A1V6PVQ4	RNase_PH domain-containing protein.	ECR1_N domain-containing protein.	0.999
A0A1V6PSN0	A0A1V6PW05	RNase_PH domain-containing protein.	Uncharacterized protein.	0.996
A0A1V6PSN0	A0A1V6PW10	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PSN0	A0A1V6PZT1	RNase_PH domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.817
A0A1V6PSN0	A0A1V6Q603	RNase_PH domain-containing protein.	Uncharacterized protein.	0.629
A0A1V6PSN0	A0A1V6Q8X0	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PSN0	A0A1V6QAC8	RNase_PH domain-containing protein.	HRDC domain-containing protein.	0.958
A0A1V6PSN0	A0A1V6QD23	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999