16 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QG12	Uncharacterized protein. (541 aa)
	A0A1V6QF37	Acetyl-coenzyme A synthetase. (670 aa)
	A0A1V6QE38	Uncharacterized protein. (655 aa)
	A0A1V6PRJ0	Uncharacterized protein. (5685 aa)
	A0A1V6Q9I2	Uncharacterized protein. (691 aa)
	A0A1V6PUA9	Uncharacterized protein. (210 aa)
	A0A1V6PU96	AMP-binding domain-containing protein. (707 aa)
	A0A1V6PTK7	Uncharacterized protein. (354 aa)
	A0A1V6PSS4	AMP-binding domain-containing protein. (637 aa)
	A0A1V6PSQ7	Uncharacterized protein. (921 aa)
	A0A1V6Q7C1	Uncharacterized protein. (236 aa)
	A0A1V6QA60	Uncharacterized protein. (631 aa)
	A0A1V6Q021	Uncharacterized protein. (686 aa)
	A0A1V6Q0L5	Uncharacterized protein. (580 aa)
	A0A1V6QP27	Uncharacterized protein. (263 aa)
	A0A1V6QP22	Uncharacterized protein. (682 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PRJ0	A0A1V6Q0L5	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A1V6PRJ0	A0A1V6QG12	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A1V6PSQ7	A0A1V6Q0L5	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6PSQ7	A0A1V6QG12	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A1V6PU96	A0A1V6Q0L5	AMP-binding domain-containing protein.	Uncharacterized protein.	0.510
A0A1V6PU96	A0A1V6QG12	AMP-binding domain-containing protein.	Uncharacterized protein.	0.505
A0A1V6PUA9	A0A1V6Q0L5	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A1V6PUA9	A0A1V6QG12	Uncharacterized protein.	Uncharacterized protein.	0.569
A0A1V6PUA9	A0A1V6QP27	Uncharacterized protein.	Uncharacterized protein.	0.859
A0A1V6Q021	A0A1V6Q0L5	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A1V6Q021	A0A1V6Q9I2	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A1V6Q021	A0A1V6QG12	Uncharacterized protein.	Uncharacterized protein.	0.569
A0A1V6Q0L5	A0A1V6PRJ0	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A1V6Q0L5	A0A1V6PSQ7	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1V6Q0L5	A0A1V6PU96	Uncharacterized protein.	AMP-binding domain-containing protein.	0.510
A0A1V6Q0L5	A0A1V6PUA9	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A1V6Q0L5	A0A1V6Q021	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A1V6Q0L5	A0A1V6Q7C1	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A1V6Q0L5	A0A1V6Q9I2	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A1V6Q0L5	A0A1V6QF37	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.588