28 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QMW0	Uncharacterized protein. (362 aa)
	A0A1V6QKC6	Uncharacterized protein. (880 aa)
	A0A1V6QH95	ANK_REP_REGION domain-containing protein. (908 aa)
	A0A1V6PR30	Uncharacterized protein. (103 aa)
	A0A1V6PS72	Uncharacterized protein. (674 aa)
	A0A1V6PV90	ANAPC5 domain-containing protein. (769 aa)
	A0A1V6Q916	Uncharacterized protein. (830 aa)
	A0A1V6QG85	Uncharacterized protein. (771 aa)
	A0A1V6QA59	Uncharacterized protein. (633 aa)
	A0A1V6QBB6	Uncharacterized protein. (617 aa)
	A0A1V6QCI0	Uncharacterized protein. (393 aa)
	A0A1V6QCX9	Spc7 domain-containing protein. (1481 aa)
	A0A1V6QDS4	Uncharacterized protein. (616 aa)
	A0A1V6QF35	TPR_REGION domain-containing protein. (396 aa)
	A0A1V6QP02	Uncharacterized protein. (807 aa)
	A0A1V6QNP8	Zn(2)-C6 fungal-type domain-containing protein. (708 aa)
	A0A1V6Q082	Uncharacterized protein. (774 aa)
	A0A1V6Q0H8	UBIQUITIN_CONJUGAT_2 domain-containing protein. (179 aa)
	A0A1V6Q1T0	Uncharacterized protein. (347 aa)
	A0A1V6Q2K1	RING-type domain-containing protein. (88 aa)
	A0A1V6Q2R8	Protein kinase domain-containing protein. (825 aa)
	A0A1V6Q3T9	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family. (587 aa)
	A0A1V6Q4N2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
	A0A1V6Q528	Uncharacterized protein. (417 aa)
	A0A1V6Q6E2	Uncharacterized protein. (1193 aa)
	A0A1V6Q7V5	Uncharacterized protein. (817 aa)
	A0A1V6QI65	Serine/threonine-protein kinase. (1142 aa)
	A0A1V6QKH9	HORMA domain-containing protein. (235 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PS72	A0A1V6PV90	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.999
A0A1V6PS72	A0A1V6Q082	Uncharacterized protein.	Uncharacterized protein.	0.912
A0A1V6PS72	A0A1V6Q0H8	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.995
A0A1V6PS72	A0A1V6Q1T0	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6PS72	A0A1V6Q2K1	Uncharacterized protein.	RING-type domain-containing protein.	0.998
A0A1V6PS72	A0A1V6Q6E2	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A1V6PS72	A0A1V6Q7V5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PS72	A0A1V6QG85	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PS72	A0A1V6QI65	Uncharacterized protein.	Serine/threonine-protein kinase.	0.869
A0A1V6PS72	A0A1V6QKH9	Uncharacterized protein.	HORMA domain-containing protein.	0.993
A0A1V6PS72	A0A1V6QMW0	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6PS72	A0A1V6QP02	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PV90	A0A1V6PS72	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PV90	A0A1V6Q082	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.904
A0A1V6PV90	A0A1V6Q0H8	ANAPC5 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.995
A0A1V6PV90	A0A1V6Q1T0	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.978
A0A1V6PV90	A0A1V6Q2K1	ANAPC5 domain-containing protein.	RING-type domain-containing protein.	0.995
A0A1V6PV90	A0A1V6Q3T9	ANAPC5 domain-containing protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.453
A0A1V6PV90	A0A1V6Q4N2	ANAPC5 domain-containing protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.484
A0A1V6PV90	A0A1V6Q6E2	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.977