25 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QNE1	S4 RNA-binding domain-containing protein. (188 aa)
	A0A1V6PQP7	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (360 aa)
	A0A1V6PR78	Uncharacterized protein. (908 aa)
	A0A1V6PRZ0	DRIM domain-containing protein. (2607 aa)
	A0A1V6PSD7	WD_REPEATS_REGION domain-containing protein. (957 aa)
	A0A1V6PU74	WD_REPEATS_REGION domain-containing protein. (1027 aa)
	A0A1V6PVH8	BUD22 domain-containing protein. (441 aa)
	A0A1V6PYM7	Brix domain-containing protein. (291 aa)
	A0A1V6PZ11	Uncharacterized protein. (768 aa)
	A0A1V6Q1H3	Uncharacterized protein. (306 aa)
	A0A1V6Q259	Bms1-type G domain-containing protein. (1192 aa)
	A0A1V6Q5B3	Uncharacterized protein. (832 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (769 aa)
	A0A1V6Q7W0	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (699 aa)
	A0A1V6Q817	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (370 aa)
	A0A1V6Q905	WD_REPEATS_REGION domain-containing protein. (971 aa)
	A0A1V6QA08	Uncharacterized protein. (393 aa)
	A0A1V6QD92	WD_REPEATS_REGION domain-containing protein. (946 aa)
	A0A1V6QDL6	Kri1_C domain-containing protein. (601 aa)
	A0A1V6QE61	Uncharacterized protein. (616 aa)
	A0A1V6QFS0	WD_REPEATS_REGION domain-containing protein. (898 aa)
	A0A1V6QI13	U3 small nucleolar RNA-associated protein 22. (1086 aa)
	A0A1V6QII4	CBF domain-containing protein. (546 aa)
	A0A1V6QJ93	Uncharacterized protein. (403 aa)
	A0A1V6QKR5	RNA helicase. (635 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6PQP7	A0A1V6PU74	A0A1V6PQP7	A0A1V6PU74	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	WD_REPEATS_REGION domain-containing protein.	0.754
A0A1V6PQP7	A0A1V6PYM7	A0A1V6PQP7	A0A1V6PYM7	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Brix domain-containing protein.	0.701
A0A1V6PQP7	A0A1V6Q1H3	A0A1V6PQP7	A0A1V6Q1H3	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Uncharacterized protein.	0.921
A0A1V6PQP7	A0A1V6Q817	A0A1V6PQP7	A0A1V6Q817	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.995
A0A1V6PQP7	A0A1V6QA08	A0A1V6PQP7	A0A1V6QA08	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Uncharacterized protein.	0.701
A0A1V6PQP7	A0A1V6QI13	A0A1V6PQP7	A0A1V6QI13	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	U3 small nucleolar RNA-associated protein 22.	0.906
A0A1V6PQP7	A0A1V6QII4	A0A1V6PQP7	A0A1V6QII4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	CBF domain-containing protein.	0.701
A0A1V6PQP7	A0A1V6QNE1	A0A1V6PQP7	A0A1V6QNE1	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	S4 RNA-binding domain-containing protein.	0.711
A0A1V6PR78	A0A1V6PRZ0	A0A1V6PR78	A0A1V6PRZ0	Uncharacterized protein.	DRIM domain-containing protein.	0.999
A0A1V6PR78	A0A1V6PSD7	A0A1V6PR78	A0A1V6PSD7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991
A0A1V6PR78	A0A1V6PU74	A0A1V6PR78	A0A1V6PU74	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
A0A1V6PR78	A0A1V6PYM7	A0A1V6PR78	A0A1V6PYM7	Uncharacterized protein.	Brix domain-containing protein.	0.985
A0A1V6PR78	A0A1V6PZ11	A0A1V6PR78	A0A1V6PZ11	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A1V6PR78	A0A1V6Q1H3	A0A1V6PR78	A0A1V6Q1H3	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A1V6PR78	A0A1V6Q259	A0A1V6PR78	A0A1V6Q259	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.998
A0A1V6PR78	A0A1V6Q5B3	A0A1V6PR78	A0A1V6Q5B3	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A1V6PR78	A0A1V6Q7W0	A0A1V6PR78	A0A1V6Q7W0	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.997
A0A1V6PR78	A0A1V6Q905	A0A1V6PR78	A0A1V6Q905	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.995
A0A1V6PR78	A0A1V6QA08	A0A1V6PR78	A0A1V6QA08	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1V6PR78	A0A1V6QD92	A0A1V6PR78	A0A1V6QD92	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.995