33 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q1M1	Uncharacterized protein. (288 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1168 aa)
	A0A1V6Q2R2	Tr-type G domain-containing protein. (717 aa)
	A0A1V6Q3S1	PUM-HD domain-containing protein. (1104 aa)
	A0A1V6Q4T0	SAM domain-containing protein. (607 aa)
	A0A1V6Q5P7	Uncharacterized protein. (1164 aa)
	A0A1V6Q8X0	Uncharacterized protein. (272 aa)
	A0A1V6Q9F2	Uncharacterized protein. (2309 aa)
	A0A1V6QAC8	HRDC domain-containing protein. (754 aa)
	A0A1V6QAX0	PUM-HD domain-containing protein. (897 aa)
	A0A1V6QBL7	Nudix hydrolase domain-containing protein. (857 aa)
	A0A1V6QBY7	PAT1 domain-containing protein. (811 aa)
	A0A1V6QGS5	Uncharacterized protein. (480 aa)
	A0A1V6QHJ5	Uncharacterized protein. (583 aa)
	A0A1V6QHR4	Uncharacterized protein; Belongs to the DEAD box helicase family. (512 aa)
	A0A1V6QML4	Endo/exonuclease/phosphatase domain-containing protein. (748 aa)
	A0A1V6QMS0	Uncharacterized protein. (329 aa)
	A0A1V6QNG1	Uncharacterized protein. (539 aa)
	A0A1V6QPH0	Uncharacterized protein. (508 aa)
	A0A1V6QPK5	WD_REPEATS_REGION domain-containing protein. (316 aa)
	A0A1V6PQP3	Sm domain-containing protein. (578 aa)
	A0A1V6PS04	Uncharacterized protein. (601 aa)
	A0A1V6PS91	Uncharacterized protein. (247 aa)
	A0A1V6PSN0	RNase_PH domain-containing protein. (394 aa)
	A0A1V6PT99	PUM-HD domain-containing protein. (822 aa)
	A0A1V6PU14	Uncharacterized protein. (324 aa)
	A0A1V6PVQ4	ECR1_N domain-containing protein. (391 aa)
	A0A1V6PW10	RNase_PH domain-containing protein. (386 aa)
	A0A1V6PW51	Uncharacterized protein. (480 aa)
	A0A1V6PXT5	Uncharacterized protein; Belongs to the DEAD box helicase family. (572 aa)
	A0A1V6PZZ2	Uncharacterized protein. (598 aa)
	A0A1V6Q1D5	RRM domain-containing protein. (198 aa)
	A0A1V6QPG5	Uncharacterized protein. (358 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6PQP3	A0A1V6PS04	A0A1V6PQP3	A0A1V6PS04	Sm domain-containing protein.	Uncharacterized protein.	0.401
A0A1V6PQP3	A0A1V6PU14	A0A1V6PQP3	A0A1V6PU14	Sm domain-containing protein.	Uncharacterized protein.	0.869
A0A1V6PQP3	A0A1V6PXT5	A0A1V6PQP3	A0A1V6PXT5	Sm domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.623
A0A1V6PQP3	A0A1V6Q1M1	A0A1V6PQP3	A0A1V6Q1M1	Sm domain-containing protein.	Uncharacterized protein.	0.918
A0A1V6PQP3	A0A1V6Q9F2	A0A1V6PQP3	A0A1V6Q9F2	Sm domain-containing protein.	Uncharacterized protein.	0.480
A0A1V6PQP3	A0A1V6QBL7	A0A1V6PQP3	A0A1V6QBL7	Sm domain-containing protein.	Nudix hydrolase domain-containing protein.	0.918
A0A1V6PQP3	A0A1V6QBY7	A0A1V6PQP3	A0A1V6QBY7	Sm domain-containing protein.	PAT1 domain-containing protein.	0.999
A0A1V6PQP3	A0A1V6QHR4	A0A1V6PQP3	A0A1V6QHR4	Sm domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.995
A0A1V6PQP3	A0A1V6QML4	A0A1V6PQP3	A0A1V6QML4	Sm domain-containing protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.570
A0A1V6PQP3	PAN2	A0A1V6PQP3	A0A1V6Q2M5	Sm domain-containing protein.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	0.403
A0A1V6PS04	A0A1V6PQP3	A0A1V6PS04	A0A1V6PQP3	Uncharacterized protein.	Sm domain-containing protein.	0.401
A0A1V6PS04	A0A1V6PW51	A0A1V6PS04	A0A1V6PW51	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A1V6PS04	A0A1V6PXT5	A0A1V6PS04	A0A1V6PXT5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.440
A0A1V6PS04	A0A1V6Q1D5	A0A1V6PS04	A0A1V6Q1D5	Uncharacterized protein.	RRM domain-containing protein.	0.476
A0A1V6PS04	A0A1V6QHJ5	A0A1V6PS04	A0A1V6QHJ5	Uncharacterized protein.	Uncharacterized protein.	0.944
A0A1V6PS04	A0A1V6QHR4	A0A1V6PS04	A0A1V6QHR4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.440
A0A1V6PS04	A0A1V6QPH0	A0A1V6PS04	A0A1V6QPH0	Uncharacterized protein.	Uncharacterized protein.	0.476
A0A1V6PS91	A0A1V6PSN0	A0A1V6PS91	A0A1V6PSN0	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6PU14	A0A1V6PS91	A0A1V6PU14	Uncharacterized protein.	Uncharacterized protein.	0.774
A0A1V6PS91	A0A1V6PVQ4	A0A1V6PS91	A0A1V6PVQ4	Uncharacterized protein.	ECR1_N domain-containing protein.	0.999