19 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PXK7	RIO domain-containing protein. (410 aa)
	A0A1V6PXK2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (455 aa)
	A0A1V6PW18	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (295 aa)
	A0A1V6PLB7	Protein kinase domain-containing protein. (443 aa)
	A0A1V6Q609	Uncharacterized protein. (732 aa)
	A0A1V6Q6K4	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (213 aa)
	A0A1V6Q7Q1	Uncharacterized protein. (199 aa)
	A0A1V6PM21	Uncharacterized protein. (192 aa)
	A0A1V6Q7L2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	A0A1V6PGQ0	Protein kinase domain-containing protein. (153 aa)
	A0A1V6Q5Z9	Uncharacterized protein. (916 aa)
	A0A1V6Q5Q7	Uncharacterized protein. (193 aa)
	A0A1V6Q4N2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
	A0A1V6Q021	Uncharacterized protein. (686 aa)
	A0A1V6QLG1	TMF_TATA_bd domain-containing protein. (873 aa)
	A0A1V6Q9I2	Uncharacterized protein. (691 aa)
	A0A1V6QL43	Protein kinase domain-containing protein. (572 aa)
	A0A1V6QI65	Serine/threonine-protein kinase. (1142 aa)
	A0A1V6QBP8	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (650 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PLB7	A0A1V6Q7Q1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.407
A0A1V6PXK2	A0A1V6Q021	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.746
A0A1V6PXK2	A0A1V6Q7L2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.973
A0A1V6PXK2	A0A1V6Q9I2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.746
A0A1V6Q021	A0A1V6PXK2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.746
A0A1V6Q021	A0A1V6Q7L2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.746
A0A1V6Q021	A0A1V6Q9I2	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A1V6Q4N2	A0A1V6Q5Q7	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Uncharacterized protein.	0.677
A0A1V6Q4N2	A0A1V6QI65	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Serine/threonine-protein kinase.	0.853
A0A1V6Q5Q7	A0A1V6Q4N2	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.677
A0A1V6Q5Q7	A0A1V6Q5Z9	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A1V6Q5Q7	A0A1V6QI65	Uncharacterized protein.	Serine/threonine-protein kinase.	0.622
A0A1V6Q5Z9	A0A1V6Q5Q7	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A1V6Q7L2	A0A1V6PXK2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.973
A0A1V6Q7L2	A0A1V6Q021	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.746
A0A1V6Q7L2	A0A1V6Q9I2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.746
A0A1V6Q7Q1	A0A1V6PLB7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.407
A0A1V6Q9I2	A0A1V6PXK2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.746
A0A1V6Q9I2	A0A1V6Q021	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A1V6Q9I2	A0A1V6Q7L2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.746