10 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QBQ4	Uncharacterized protein. (236 aa)
	A0A1V6PZU3	Uncharacterized protein. (1436 aa)
	A0A1V6PXL5	Uncharacterized protein. (2043 aa)
	A0A1V6PW10	RNase_PH domain-containing protein. (386 aa)
	A0A1V6PSW2	Histone H2A; Belongs to the histone H2A family. (138 aa)
	A0A1V6PSN0	RNase_PH domain-containing protein. (394 aa)
	A0A1V6PS91	Uncharacterized protein. (247 aa)
	A0A1V6QPG5	Uncharacterized protein. (358 aa)
	A0A1V6QDF0	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (404 aa)
	A0A1V6QD23	RNase_PH domain-containing protein. (268 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PS91	A0A1V6PSN0	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6PW10	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6PXL5	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A1V6PS91	A0A1V6PZU3	Uncharacterized protein.	Uncharacterized protein.	0.851
A0A1V6PS91	A0A1V6QBQ4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PS91	A0A1V6QD23	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PS91	A0A1V6QPG5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PSN0	A0A1V6PS91	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PSN0	A0A1V6PW10	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PSN0	A0A1V6PXL5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.938
A0A1V6PSN0	A0A1V6PZU3	RNase_PH domain-containing protein.	Uncharacterized protein.	0.765
A0A1V6PSN0	A0A1V6QBQ4	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PSN0	A0A1V6QD23	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PSN0	A0A1V6QPG5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PW10	A0A1V6PS91	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PW10	A0A1V6PSN0	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A0A1V6PW10	A0A1V6PXL5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.945
A0A1V6PW10	A0A1V6PZU3	RNase_PH domain-containing protein.	Uncharacterized protein.	0.830
A0A1V6PW10	A0A1V6QBQ4	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998
A0A1V6PW10	A0A1V6QD23	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998