20 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QK23	RRM domain-containing protein. (382 aa)
	A0A1V6QIF1	Small nuclear ribonucleoprotein G. (77 aa)
	A0A1V6QH13	RRM domain-containing protein. (429 aa)
	A0A1V6QEP5	G-patch domain-containing protein. (769 aa)
	A0A1V6QEH3	Uncharacterized protein. (702 aa)
	A0A1V6Q6X4	Uncharacterized protein. (197 aa)
	A0A1V6Q492	Uncharacterized protein. (216 aa)
	A0A1V6Q1D5	RRM domain-containing protein. (198 aa)
	A0A1V6Q156	Uncharacterized protein. (374 aa)
	A0A1V6QPH0	Uncharacterized protein. (508 aa)
	A0A1V6PQB6	Uncharacterized protein. (291 aa)
	A0A1V6Q073	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1395 aa)
	A0A1V6PZH4	Sde2_N_Ubi domain-containing protein. (301 aa)
	A0A1V6PWS0	Uncharacterized protein. (825 aa)
	A0A1V6PWL3	Uncharacterized protein. (758 aa)
	A0A1V6PUN3	Uncharacterized protein. (488 aa)
	A0A1V6PS04	Uncharacterized protein. (601 aa)
	A0A1V6PRK0	Uncharacterized protein. (670 aa)
	A0A1V6PR67	Uncharacterized protein. (248 aa)
	A0A1V6PR46	Uncharacterized protein. (572 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PQB6	A0A1V6PR46	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A1V6PQB6	A0A1V6PR67	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A1V6PQB6	A0A1V6PRK0	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1V6PQB6	A0A1V6PWL3	Uncharacterized protein.	Uncharacterized protein.	0.972
A0A1V6PQB6	A0A1V6PWS0	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1V6PQB6	A0A1V6PZH4	Uncharacterized protein.	Sde2_N_Ubi domain-containing protein.	0.942
A0A1V6PQB6	A0A1V6Q073	Uncharacterized protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.908
A0A1V6PQB6	A0A1V6Q1D5	Uncharacterized protein.	RRM domain-containing protein.	0.480
A0A1V6PQB6	A0A1V6Q492	Uncharacterized protein.	Uncharacterized protein.	0.946
A0A1V6PQB6	A0A1V6Q6X4	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A1V6PQB6	A0A1V6QEH3	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A1V6PQB6	A0A1V6QEP5	Uncharacterized protein.	G-patch domain-containing protein.	0.961
A0A1V6PQB6	A0A1V6QH13	Uncharacterized protein.	RRM domain-containing protein.	0.987
A0A1V6PQB6	A0A1V6QIF1	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.908
A0A1V6PQB6	A0A1V6QK23	Uncharacterized protein.	RRM domain-containing protein.	0.960
A0A1V6PQB6	A0A1V6QPH0	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A1V6PR46	A0A1V6PQB6	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A1V6PR46	A0A1V6PR67	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A1V6PR67	A0A1V6PQB6	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A1V6PR67	A0A1V6PR46	Uncharacterized protein.	Uncharacterized protein.	0.617